Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq11 230 3e-55 >seq11 Length=1501259 Score = 230 bits (254), Expect = 3e-55 Identities = 1105/1734 (64%), Gaps = 57/1734 (3%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 |||||| || ||||| ||||| |||||| | |||||| |||||||| ||||| Sbjct 718602 GTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGTCAATGATGGT 718543 Query 109560 CTTTTG-GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCA 109618 |||||| | ||||| |||| |||||||||||||| | ||| || || | || |||| Sbjct 718542 CTTTTGAGATAATT-CCCAAACAGTCTTGTACAAGTCCTTCATTTCTTGTGGGATGTTTG 718484 Query 109619 CGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATC---CTTCATCTCTTTCGACC 109675 | | ||| || || ||| || | |||| | |||||| ||| || Sbjct 718483 GTAACTGTTGGATGGA---ACCGTTGTTGGCAATGATGTTGGACTTCATGGCTTCATCCC 718427 Query 109676 AGAGACCGACCTTTTTGAGATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACC 109733 | | ||| | | | ||| | ||||||| ||| | | || | ||||||| Sbjct 718426 AAATACCCATATCAACTAAATCCTTCAACAAGTATGGAT--TAACAATTTGGTATTCACC 718369 Query 109734 AG-CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 || |||| || | || | ||| ||||| | ||| | ||||||||||| ||||||| | Sbjct 718368 AGACAAG-GTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTGTAAC 718310 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCA-TGAGAAGACTGTTTCGGAGA 109851 |||| ||||| | ||||||||| || ||||| ||||| | | | ||| ||||| | | Sbjct 718309 CTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGA-GTTTCTTAAA 718251 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC 109911 || | | | | | || | | | ||||| || ||| || ||| | Sbjct 718250 CCATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTC-------CCA-TARGTTTGTTG 718199 Query 109912 T--CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAAC 109969 || | | ||| || ||| | ||||| | | ||| || || || | | || Sbjct 718198 GAGCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAG 718139 Query 109970 TCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACA 110029 | || | || |||||||| || || || | ||||| |||| || || ||||| | Sbjct 718138 AGGCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGA 718079 Query 110030 TAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCAC 110089 |||| ||||| || ||| |||| | | || |||| |||| || |||| | Sbjct 718078 TAGTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGTCAAATGGAACTCTCA 718019 Query 110090 AAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGT 110149 | | || || |||| || ||||| |||||||| | | |||| || | || |||||| Sbjct 718018 ACATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGT 717959 Query 110150 TAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCT 110209 | || | || ||||||||| || ||||| |||| | ||| || || ||| | |||| Sbjct 717958 TGGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCT 717899 Query 110210 TCGTCACAGTCTTCGT-GATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC---- 110264 | | || | ||| || ||||| || || | | |||| | |||| |||| Sbjct 717898 TGG-CAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGG 717840 Query 110265 -CTTA-------TTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTC 110316 ||| |||||| | || | |||| ||| || | || || |||| ||| Sbjct 717839 TCTTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTT 717780 Query 110317 TCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCC 110376 || | | || | |||||| | |||||| |||||||||||| || ||| |||| Sbjct 717779 TCMTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCC 717720 Query 110377 AAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCA 110436 |||||||| || || || || ||| || | |||||| || | ||| |||| |||||| Sbjct 717719 AAGTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCA 717660 Query 110437 GTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTA 110496 ||||| || || | | | ||||| | ||| | | ||| || || | Sbjct 717659 GTTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTCTTTCTW 717600 Query 110497 GCGAGACCTTCCTCCTCGTACTTGGTGTACAAG-TCCTCAAATTCCTGTCCGTACACATC 110555 | |||||| ||| || ||| | ||| | || ||||| | || || |||| Sbjct 717599 CCTCTWCCTTCCAACTCATA-TTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATC 717541 Query 110556 AGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCT 110615 | | ||| || | ||| |||| | || ||||| || ||| || || Sbjct 717540 ACTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCT 717481 Query 110616 CTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTT 110674 ||||||||||| || |||||||| | || | ||| | || | ||| || |||| Sbjct 717480 CTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATT-TCTT 717422 Query 110675 CATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGA 110734 | | ||| ||||| | | || | || || | |||||| |||||||||||||| | Sbjct 717421 CTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCA 717362 Query 110735 GATAGACAGCGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTG 110788 || | || | || || ||| || ||| || | |||||| | || | Sbjct 717361 AGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCT---TGATCAACATATCTGGCGG 717305 Query 110789 TGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAA 110848 || |||||||| |||| ||||||||| | |||| ||| ||| || ||||| || Sbjct 717304 TGTTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAA 717245 Query 110849 TTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTAC 110908 | || | ||| | |||| |||||| |||| |||||||||||| || ||| Sbjct 717244 TGTAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGG 717185 Query 110909 TAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTT-GTTG 110967 ||||| ||||| || | | || | || ||||| ||||| || || |||| ||| Sbjct 717184 AGATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTG 717125 Query 110968 GCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGT 111027 | ||||| ||||| ||||| ||||| | || || || |||||||| | || || Sbjct 717124 ATACCAAGAAA-CAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGA 717066 Query 111028 GTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACA 111087 | || || |||| | ||| |||||| |||||| || || | | | | Sbjct 717065 GAGGCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATG 717006 Query 111088 TCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGC 111147 | || |||||||||||||| ||||||| ||||| || | ||| || |||| | | | Sbjct 717005 TTTTCACCGTGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATC 716946 Query 111148 TTTCCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200 || || | | | || ||| |||| || | |||||||| ||||||||| Sbjct 716945 TTACCGTTGATCTTCAATAGATAAGATCTT-TCCAAGGTCTTGAAACCAAAGTA 716893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975874842600