Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq11 298 6e-76 >seq11 Length=1501259 Score = 298 bits (330), Expect = 6e-76 Identities = 964/1485 (65%), Gaps = 45/1485 (3%) Strand=Plus/Minus Query 105922 GGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGAT 105981 ||||||||| || ||||| | ||| | ||||| || |||||||| | ||| | || Sbjct 718362 GGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTGTAACCTAGAAT 718303 Query 105982 TTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTC 106041 ||| | ||||| || ||||||||||| || | || | ||| | | ||| | Sbjct 718302 TTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTTAAACCATG--- 718246 Query 106042 CTTG---ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT--CACCTTCC 106096 |||| || | ||| | |||||||||| | | | ||| | || | | | Sbjct 718245 CTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCA--TARGTTTGTTGGAGCAACRTTC 718188 Query 106097 CACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAA 106156 || || |||| | || |||||||| | || || || || | | |||||| | Sbjct 718187 CAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGGCATAGGTA 718128 Query 106157 CCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAG 106216 |||| | ||||| ||||| || || | | |||||||| || ||||||||| Sbjct 718127 CCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAGTTTCAAAG 718068 Query 106217 ATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAAT 106276 || || |||| | |||||| | || || ||||||| | ||| || || Sbjct 718067 ATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGTCAAATGGAACTCTCAACATCATGAAR 718008 Query 106277 ACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC 106336 |||| || |||||||||||||| ||| |||| |||||||||| ||| || || ||| Sbjct 718007 GCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGTTGGATCTTCTA 717948 Query 106337 GCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 106396 ||||| ||||| || || | ||||||||||| || || | || |||| || | Sbjct 717947 GCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGGCAATGACT 717888 Query 106397 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC------TCTTCA------ 106444 || || |||||||| |||| ||||| |||| | ||| |||||| Sbjct 717887 TTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTTCAGAAACC 717828 Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504 |||||| | ||| | ||| | || ||||| || || ||||| || || | | ||| Sbjct 717827 TTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTTCMTTKTCATCA 717768 Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 | ||| || | |||||| |||||||||||| || || || ||||| ||||||||| Sbjct 717767 GAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCAAGTTCTTTTGG 717708 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||| ||||| || | ||||||||| | ||| | || || || || || || || Sbjct 717707 TTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAGTTTCAGTTTGR 717648 Query 106625 GACTTGAGAATTGCCTTCCAC-ACATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCC 106680 | | | || || | |||| || | | | || | |||| | | | | || Sbjct 717647 GCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTG----ATGGTCTTTCTWCCTCTWCC 717592 Query 106681 CTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACC 106740 ||| ||| || | || || ||| || || ||||| || || | ||| Sbjct 717591 TTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATCACTCAAACC 717532 Query 106741 TGGTGCCTTGTCT-GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 106799 ||| | ||| || ||| |||| | | ||| | | || ||| || | |||||||| Sbjct 717531 TGGAG-CTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGA 717473 Query 106800 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCT 106858 | | ||||||||||| || | || || | ||||| | | || ||||| | ||| Sbjct 717472 ACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGA-TTTCTTCTTTACCG 717414 Query 106859 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 106918 ||||| || | |||| ||| || | |||||| | ||||||||| || | || | Sbjct 717413 TGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAG 717354 Query 106919 GCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 106974 || | | || || | | ||| |||||| ||||| | || ||| ||| || Sbjct 717353 GCAAAGGCACCTGGTCTCTTG-TTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAA 717295 Query 106975 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTT 107034 || | | ||| ||||| | ||||| || ||| || || || ||| ||| Sbjct 717294 GACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTAAGAACC 717235 Query 107035 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 107094 | ||| ||| | | |||||||||| |||||||| ||||| ||| |||||||| || Sbjct 717234 AGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGATTTGAGC 717175 Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154 ||| ||| | | || | |||||||||| || ||||| ||||| | | | | ||| Sbjct 717174 ACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATACCAAGAA 717115 Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214 ||| |||||| || |||||||| ||||| |||||||| | ||||| | ||||| | Sbjct 717114 ACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGT 717055 Query 107215 GAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTG 107274 ||| | ||| |||||| || ||| || || | ||| || |||| ||| ||||| Sbjct 717054 GAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTTCACCGTG 716995 Query 107275 GATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAG 107334 || || | || || | ||| | || || ||| ||| |||| | || | || | || Sbjct 716994 AATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTACCGTTGAT 716935 Query 107335 CCGTTGA--AGAT-AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | || | |||| || |||| || | ||| |||| ||||||||| Sbjct 716934 C--TTCAATAGATAAGATCTT-TCCAAGGTCTTGAAACCAAAGTA 716893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080