Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq12 109 6e-19 >seq12 Length=1912120 Score = 109 bits (120), Expect = 6e-19 Identities = 205/302 (68%), Gaps = 5/302 (2%) Strand=Plus/Minus Query 153165 TTAAAAAATATAGCAAAAGCAAACAAAGT--AAAACCTAG-TCTTATAGGTCAAGGATAC 153221 || || || || |||||| ||| ||| | || || | ||| |||||| |||| ||| Sbjct 862515 TTGAAGAACATTGCAAAATTAAATAAATTTGAAWACAAAAATCTAATAGGTAAAGGTTAC 862456 Query 153222 TATGGAAC-CATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTA 153280 || || || | ||| ||||||||| ||||| | || || ||| ||||| Sbjct 862455 TACAACACACACTT-ACCTTTAGTCATACAAAGAAACTTGCTAGARTCTCCAGAATGGTA 862397 Query 153281 CACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAA 153340 ||| || || ||||| || |||||||| |||||||| || ||||| ||| | | || || Sbjct 862396 CACWTCCTATACTCCATACCAAGCTGAAATATCTCAAGGTAGATTAGAATCKYTRTTGAA 862337 Query 153341 TTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGA 153400 | ||| || | ||||| || | || || || ||| | || ||||| ||||||| Sbjct 862336 CTTCCARACCATGATCACTGACTTAACCGGTTTGGAAATCTCCAATGCATCCTTATTAGA 862277 Query 153401 TGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATATAATTCTACAAGAGATAAGAA 153460 ||||| ||||| || | ||||| || | |||| || | | | | || |||||| Sbjct 862276 TGAAGGTACTGCTGCTGGTGAAGCCCTGTTGGTAGCTTAYCACTTAATGAAAGGTAAGAA 862217 Query 153461 GA 153462 || Sbjct 862216 GA 862215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212676917280