Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq12 105 8e-18 >seq12 Length=1912120 Score = 105 bits (116), Expect = 8e-18 Identities = 179/262 (68%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 157878 TCTTATAGGTCAAGGATACTATGGAACCATCAC--ACCCCCAGTCATACAGCGAAACGTT 157935 ||| |||||| |||| ||||| ||| ||| ||| ||||||||| ||||| | Sbjct 862474 TCTAATAGGTAAAGGTTACTAC--AACACACACTTACCTTTAGTCATACAAAGAAACTTG 862417 Query 157936 CTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGA 157995 || || ||| |||||||| || || ||||| || |||||||| |||||||| || Sbjct 862416 CTAGARTCTCCAGAATGGTACACWTCCTATACTCCATACCAAGCTGAAATATCTCAAGGT 862357 Query 157996 AGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATA 158055 ||||| ||| | | || || | ||| || | ||||| || | || || | || Sbjct 862356 AGATTAGAATCKYTRTTGAACTTCCARACCATGATCACTGACTTAACCGGTTTGGAAATC 862297 Query 158056 GCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATAT 158115 | || ||||| |||||||||||| ||||| || | ||||| || || |||| || Sbjct 862296 TCCAATGCATCCTTATTAGATGAAGGTACTGCTGCTGGTGAAGCCCTGTTGGTAGCTTAY 862237 Query 158116 AATTCTACAAGAGATAAGAAGA 158137 | | | | || |||||||| Sbjct 862236 CACTTAATGAAAGGTAAGAAGA 862215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051075039120