Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq14 143 6e-29 seq11 113 1e-19 >seq14 Length=450723 Score = 143 bits (158), Expect = 6e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || || ||||| || ||||| || ||||| || | | ||| Sbjct 422095 TCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGT 422154 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| |||||||| | || |||||| || || || || || Sbjct 422155 TCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACC 422214 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| ||||| ||| || | || |||| || ||| ||| || || | Sbjct 422215 TTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACCTCCAA 422274 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| ||||| || || | |||||||||||| | |||||||| Sbjct 422275 AGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTT 422318 >seq11 Length=1501259 Score = 113 bits (124), Expect = 1e-19 Identities = 207/300 (69%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630 || ||||||||||| | ||| || | |||| | | ||| | |||||||||||||| Sbjct 717427 ATCAGAGCCAGAGAYTTATTCCCAGCYCTTTGGATTCCAGATTTGTTCATGAAGAGAGTC 717486 Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGA-TGATGT 160689 || | ||||| ||||||| | | |||| ||| | |||||| || || |||| ||||| Sbjct 717487 AAGGCCAATGCTGATTGGACCTTGTTCTCTCCTAGTGAAGCTCCAGG-TTTGAGTGATGC 717545 Query 160690 TTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749 ||||||| || ||||| | |||||||| ||| || || || |||| | ||| Sbjct 717546 TTATGGTGATGAATTCGAAAAGCTTTATGATCAATATGAGTTGGAAGGWAGAGGWAGAAA 717605 Query 160750 GGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTAT 160809 | | | ||||||||| | ||||| | |||| | | || ||| || |||| Sbjct 717606 GACCATCAAGGCCCAAAAGTTGTGGTACGCCATCTTAGAAGCYCAAACTGAAACTGGTAC 717665 Query 160810 GCCCTTTATCGCATACAAGGATGCCATCTGTCGCAAG-AGT--AACCAGAAGAACTTTGG 160866 || || || | ||||||||| | |||| |||| ||| ||||| |||||||| || Sbjct 717666 TCCATTCATTGTTTACAAGGATTC---CTGTAACAAGAAGTCCAACCAAAAGAACTTGGG 717722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481358341039