Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2 129 7e-25 >seq2 Length=1277918 Score = 129 bits (142), Expect = 7e-25 Identities = 350/537 (65%), Gaps = 9/537 (2%) Strand=Plus/Plus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||| ||||| ||||| ||| ||||||||||| ||||| | ||||| || || || Sbjct 605554 AACAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAG 605613 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 ||||| || || ||||| |||||| | || || | ||| || || || ||||| ||||| Sbjct 605614 AAGGTCAAACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCG 605673 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || ||||| | ||| ||||| || || || || || || | | | | || | Sbjct 605674 GAGAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCC 605733 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTC---AATTGTT 37403 | || |||||| | | | ||| || |||||| || | ||| ||| ||| Sbjct 605734 TTGTCTTGGATCCATCTGATGGCCCATTCGGCCTTTTCCTTGA---TTTCAGGAATGGTT 605790 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 || || || || || | || | ||||| | | || | || || || || | | | Sbjct 605791 TCTATGGCATTGAATAAGAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAAT 605850 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 || || |||| ||||| || ||||| || || || ||||| || |||||| | Sbjct 605851 AAGGAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTG 605910 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 ||||| | | ||| || || | | || | | | | ||||| || || || || ||| Sbjct 605911 GCTTCTGGAATTTGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCA 605970 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC---ATCATTTGAT 37640 ||| || |||||||| || | || ||||| |||||| ||||| | Sbjct 605971 TCAGAGGCAGCAAAGAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATT 606030 Query 37641 AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 || ||||| |||| | ||| || || ||||||| ||| ||| | ||||| ||| Sbjct 606031 CTGTTGTTCCAGTCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAA 606087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316674132680