Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 116 7e-21 >seq2 Length=1277918 Score = 116 bits (128), Expect = 7e-21 Identities = 284/431 (66%), Gaps = 6/431 (1%) Strand=Plus/Plus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||| || |||||||| | || ||| | | ||||||||||| | | Sbjct 605563 CAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAA 605622 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || ||| || | |||||| || || || || || || ||||||||| Sbjct 605623 CCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAG 605682 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 | ||||| || || ||||| || || || || | || |||| ||||||| | Sbjct 605683 ACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGG 605742 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | ||||| || ||||| | |||||| || || || |||||||| | Sbjct 605743 ATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTG 605802 Query 48371 ---AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTAC 48427 |||| | || || | | |||| | || || | || | ||| Sbjct 605803 AATAAGAATTCGTTTTCCTTA---GKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAG 605859 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 | || ||||| | || || || ||| ||||| || ||||| | |||| || Sbjct 605860 GTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGA 605919 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | || || || | ||||| | || | || ||||| ||||| || ||||| || ||| Sbjct 605920 ATTTGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCA 605979 Query 48548 GCAAAGAAGGC 48558 ||||||||||| Sbjct 605980 GCAAAGAAGGC 605990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532602049280