Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq11 181 5e-41 >seq11 Length=1501259 Score = 181 bits (200), Expect = 5e-41 Identities = 351/517 (68%), Gaps = 4/517 (1%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||| |||| || |||||||||||| || ||| ||| ||| || |||||||||||| Sbjct 717518 GGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATC 717459 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | || ||||| ||||| ||||| ||||||||||| ||||| |||||| | | Sbjct 717458 CAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTCTTTACCGTGGTTCTTTCTGATG 717399 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||||||||| |||||||||||||||||||| || || | ||||| |||| | Sbjct 717398 TCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAGGCAAAGGCACCTGGT 717339 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 || || ||||||||||| || ||||| || || | ||||| ||| | | ||| ||| Sbjct 717338 CTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGA 717279 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 | || ||| | ||| ||||| || | ||| | || || || ||||| || | | Sbjct 717278 ATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTG 717219 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTA 26251 || || | ||| || |||||||| || || || ||||| || | || Sbjct 717218 TGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTG 717159 Query 26252 TCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGC 26311 ||| | || || | ||| || | |||||| || || |||||||| || | ||| Sbjct 717158 TCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGA 717099 Query 26312 GAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTC 26371 | | || || | ||| || || || || | || || || | |||| || | | Sbjct 717098 GGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGAC 717039 Query 26372 A--AAGCTGTATAAGTTTCAAGAACTTCATCGATATT 26406 | ||| || |||||||||| |||| ||||| || Sbjct 717038 ATCAAGTTG--TAAGTTTCAATGACTTTGTCGATGTT 717004 Score = 111 bits (122), Expect = 8e-20 Identities = 320/488 (66%), Gaps = 6/488 (1%) Strand=Plus/Minus Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754 ||||| | ||||||||| ||||| |||||| ||| |||||||||| || ||||| || Sbjct 718697 GTTCTCAAATAATACATACCAGTCTTCAATCCCTTACTCCAACCGTAGAAGTGCATGGAA 718638 Query 24755 GTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACA 24814 || | || | ||| ||| | | | |||||| || |||| ||| || Sbjct 718637 GTCAACTTACCCATGGTTGGAGCCATGATGTGGATGTTCATGGAGTGAGATTGATCAATG 718578 Query 24815 AAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTT 24874 || ||||||||| ||||| | ||||||||| || || |||| || || | || Sbjct 718577 AATGCTTGTCTATCAGCAGCCATGTCAATGATGGTCTTTTGAGATAATTCCCAAACAGTC 718518 Query 24875 TTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCT 24934 ||||| || || || || ||| || ||| | | ||| | || || || | | Sbjct 718517 TTGTACAAGTCCTTCATTTCTTGTGGGATGTTTGGTAACTGTTGGATGGAACCGTTGT-T 718459 Query 24935 CTCAAT-AGATTCAATCTCATA--TTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCTA 24991 |||| | || | |||| ||| ||||| | || | | | ||| | Sbjct 718458 GGCAATGATGTTGGACTTCATGGCTTCATC--CCAAATACCCATATCAACTAAATCCTTC 718401 Query 24992 ATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTT 25051 | ||||| | ||| | || |||| |||||||| |||||| | | ||| Sbjct 718400 AACAAGTATGGATTAACAATTTGGTATTCACCAGACAAGGTTCTTCTGGAGTACATGTTG 718341 Query 25052 GAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGC 25111 |||||||||||||| ||||||||||| | |||| ||||| ||||| || || |||||| Sbjct 718340 GAAGTGAATGGTTCGAAACATTCATTGTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGC 718281 Query 25112 ATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTA 25171 ||| || | ||| | || ||||| ||||||| || |||||| | ||||||| | Sbjct 718280 ATTGGAGCAACTAACAAGGAGTTTCTTAAACCATGCTTGGCAATCTTCTTCTTTAATTCA 718221 Query 25172 TCCCAATC 25179 ||||| || Sbjct 718220 TCCCAGTC 718213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039947573275