Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq12 109 6e-19 >seq12 Length=1912120 Score = 109 bits (120), Expect = 6e-19 Identities = 205/302 (68%), Gaps = 5/302 (2%) Strand=Plus/Plus Query 139825 TCTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTT 139884 |||||||| || | | | | || |||| || || || || | || ||||| ||| Sbjct 862215 TCTTCTTACCTTTCATTAAGTGRTAAGCTACCAACAGGGCTTCACCAGCAGCAGTACCTT 862274 Query 139885 CATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGT 139944 ||||||||| ||||| || | ||| || || || | || ||||| | || ||| Sbjct 862275 CATCTAATAAGGATGCATTGGAGATTTCCAAACCGGTTAAGTCAGTGATCATGGTYTGGA 862334 Query 139945 AATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATG 140004 | || || | | ||| ||||| || |||||||| |||||||| || ||||| || || | Sbjct 862335 AGTTCAAYARMGATTCTAATCTACCTTGAGATATTTCAGCTTGGTATGGAGTATAGGAWG 862394 Query 140005 TGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATG-GTTCCA 140063 ||||||| ||| || || | ||||| ||||||||| ||| | || || Sbjct 862395 TGTACCATTCTGGAGAYTCTAGCAAGTTTCTTTGTATGACTAAAGGT-AAGTGTGTGTTG 862453 Query 140064 TAGTATCCTTGACCTATAAGA-CTAGGTTTT--ACTTTGTTTGCTTTTGCTATATTTTTT 140120 ||||| |||| |||||| ||| | || || | ||| ||| |||||| || || || Sbjct 862454 TAGTAACCTTTACCTATTAGATTTTTGTWTTCAAATTTATTTAATTTTGCAATGTTCTTC 862513 Query 140121 AA 140122 || Sbjct 862514 AA 862515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998276962840