Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11 349 4e-91 >seq11 Length=1501259 Score = 349 bits (386), Expect = 4e-91 Identities = 979/1492 (66%), Gaps = 37/1492 (2%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCT--TCAACGGCTCGATGGCATCCTC 75202 ||||||||| |||| ||| | || |||| || |||| | || | || | || | || Sbjct 716893 TACTTTGGTTTCAAGACCTTGGA-AAGATCTTATCTATTGAA--GATCAACGGTAAGATC 716949 Query 75203 ATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATT 75262 | |||| || || || || ||||| | || || | || || ||||| ||| |||| Sbjct 716950 GTTGAAAGACCGCAACACTTGATCATGAGAGTTGCTGTTGGTATTCACGGTGAAAACATC 717009 Query 75263 GATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCA 75322 || ||| | || || ||| || |||||| ||| | |||| ||||| | ||| Sbjct 717010 GACAAAGTCATTGAAACTTACAACTTGATGTCTCAAAGATACTTCACCCACGCCTCTCCA 717069 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 || | |||||||| ||||| |||||||| || |||||| ||| ||| | | | | Sbjct 717070 ACTTTGTTCAATGCCGGTACTCCAAGACCTCAAATGTCCTCTTGTTTCTTGGTATCAATG 717129 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||| ||||| || |||||||||| | || | | ||| ||||| |||||||| ||| Sbjct 717130 AAGGACGACTCCATTGACGGTATCTACGACACCTTGAAGGAATGTGCTCAAATCTCCAAG 717189 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 ||||| |||||||| |||||||||| | | ||| ||| | ||| ||| Sbjct 717190 ACTGCTGGTGGTATTGGTTTGCACATCCACAACATCAGATCCACTGGTTCTTACATTGCA 717249 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || || ||| || ||||| | ||||| ||| | | || || ||| ||| || Sbjct 717250 GGTACCAACGGTACTTCCAATGGTTTGATTCCTATGGTCAGAGTCTTCAACAACACCGCC 717309 Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAA 75616 | ||||| |||||| || | |||| | || || | || | ||||||||| Sbjct 717310 AGATATGTTGATCAAGGTGG---TAACAAGAGACCAGGTGCCTTTGCCTTGTACTTGGAA 717366 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 |||||||| | |||||| | || ||| |||| | || ||||| ||| | ||||| Sbjct 717367 CCATGGCACTCAGATATCTTTGATTTCATTGACATCAGAAAGAACCACGGTAAAGAAGAA 717426 Query 75677 GCTCGGTGT-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 || | | ||||| | || || | || ||||||||||| | ||||||||| | || Sbjct 717427 A-TCAGAGCCAGAGAYTTATTCCCAGCYCTTTGGATTCCAGATTTGTTCATGAAGAGAGT 717485 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGACG 75794 ||| || | | ||| | | |||| ||| || ||| | |||||| | || | Sbjct 717486 CAAGGCCAATGCTGATTGGACCTTGTTCTCTCCTAGTGAAG-CTCCAGGTTTGAGTGATG 717544 Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATG 75854 | ||||| || || ||| || || | ||||| ||| || |||| | Sbjct 717545 CTTATGGTGATGAATTCGAAAAGCTTTATGATCAATATGAGTTGGAAGGWAGAGGWAGAA 717604 Query 75855 CGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 ||| | | || | | | ||| ||| | || || | || | || || || ||||| Sbjct 717605 AGACCAT-CAAGGCCCAAAAGTTGTGGTACGCCATCTTAGAAGCYCAAACTGAAACTGGT 717663 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 || |||| || ||||||||||| | |||||||||||| ||||||||||| ||||| Sbjct 717664 ACTCCATTCATTGTTTACAAGGATTCCTGTAACAAGAAGTCCAACCAAAAGAACTTGGGT 717723 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || ||||| ||| || | || |||||| | || ||| | ||| | | || || Sbjct 717724 ACCATCAARTCCTCCAACTTGTGTTGTGAAATTGTTGAATACTCTGATGAMAAKGAAACT 717783 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA------TGAAG----- 76082 ||||| || || ||||| || | ||| | ||| | |||||| ||||| Sbjct 717784 GCTGTYTGTAACTTGGCYTCTGTTGCCTTGCCAGCCTTTGTCAAGGTTTCTGAAGACCAA 717843 Query 76083 -AGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAAT 76141 |||| | |||| ||||| |||| |||||||| || || | || |||| || Sbjct 717844 AAGACWCAAACTTATGATTTCCAAAAGCTTCATGATGTCTGTAAAGTCATTGCCAAGAAC 717903 Query 76142 CTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATG 76201 | || || ||||||||||| | || || ||||| ||||| ||| || || ||| Sbjct 717904 TTGAATGCTGTTATTGACAGAAACTACTACCCTGTTGAAACTGCTAGAAGATCCAACATG 717963 Query 76202 CGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC 76261 |||||||||| |||| ||| |||||||||||||| || |||| || || ||| | Sbjct 717964 AGACACAGACCAATTGCTTTAGGTGTTCAAGGTCTTGCTGATGCYTTCATGATGTTGAGA 718023 Query 76262 TACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTAT 76321 ||||||| || || | |||||| | |||| || ||||||||||| || ||| Sbjct 718024 GTTCCATTTGACTCTGAAAAGGCCAAGCAATTGAACATTCAAATCTTTGAAACTATCTAT 718083 Query 76322 CACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTT 76381 ||||| | | || || | ||||| ||||| | ||||| |||||| | | Sbjct 718084 CACGCTGCTTTAGAAGCTTCTACGGAATTAGCTGAGGTTGAAGGTACCTATGCCTCTTAC 718143 Query 76382 GAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTG--AAACCA 76439 || || || || || |||||||| || | || | || ||| | | || | || Sbjct 718144 GAAGGATCACCAGCTTCCCAAGGTGTCTTGCAATACGACTACTGGAAYGTTGCTCCAACA 718203 Query 76440 AGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 76499 | | | | |||||||||| | ||| | || || | ||| | | ||| Sbjct 718204 AACYTA--TGGGACTGGGATGAATTAAAGAAGAAGATTGCCAAGCATGGTTTAAGAAACT 718261 Query 76500 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 76559 | || | || ||||||||||| || ||||| | ||||| | ||| | ||||||| Sbjct 718262 CCTTGTTAGTTGCTCCAATGCCAACTGCTTCCACTTCCCAAATTCTAGGTTACAATGAAT 718321 Query 76560 GCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGA 76611 | || ||||||| ||| | ||||| ||| ||||||||| | | ||||| Sbjct 718322 GTTTCGAACCATTCACTTCCAACATGTACTCCAGAAGAACCTTGTCTGGTGA 718373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569473228960