Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq11 349 4e-91
>seq11
Length=1501259
Score = 349 bits (386), Expect = 4e-91
Identities = 979/1492 (66%), Gaps = 37/1492 (2%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCT--TCAACGGCTCGATGGCATCCTC 75202
||||||||| |||| ||| | || |||| || |||| | || | || | || | ||
Sbjct 716893 TACTTTGGTTTCAAGACCTTGGA-AAGATCTTATCTATTGAA--GATCAACGGTAAGATC 716949
Query 75203 ATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATT 75262
| |||| || || || || ||||| | || || | || || ||||| ||| ||||
Sbjct 716950 GTTGAAAGACCGCAACACTTGATCATGAGAGTTGCTGTTGGTATTCACGGTGAAAACATC 717009
Query 75263 GATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCA 75322
|| ||| | || || ||| || |||||| ||| | |||| ||||| | |||
Sbjct 717010 GACAAAGTCATTGAAACTTACAACTTGATGTCTCAAAGATACTTCACCCACGCCTCTCCA 717069
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
|| | |||||||| ||||| |||||||| || |||||| ||| ||| | | | |
Sbjct 717070 ACTTTGTTCAATGCCGGTACTCCAAGACCTCAAATGTCCTCTTGTTTCTTGGTATCAATG 717129
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||| ||||| || |||||||||| | || | | ||| ||||| |||||||| |||
Sbjct 717130 AAGGACGACTCCATTGACGGTATCTACGACACCTTGAAGGAATGTGCTCAAATCTCCAAG 717189
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502
||||| |||||||| |||||||||| | | ||| ||| | ||| |||
Sbjct 717190 ACTGCTGGTGGTATTGGTTTGCACATCCACAACATCAGATCCACTGGTTCTTACATTGCA 717249
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| || || ||| || ||||| | ||||| ||| | | || || ||| ||| ||
Sbjct 717250 GGTACCAACGGTACTTCCAATGGTTTGATTCCTATGGTCAGAGTCTTCAACAACACCGCC 717309
Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAA 75616
| ||||| |||||| || | |||| | || || | || | |||||||||
Sbjct 717310 AGATATGTTGATCAAGGTGG---TAACAAGAGACCAGGTGCCTTTGCCTTGTACTTGGAA 717366
Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676
|||||||| | |||||| | || ||| |||| | || ||||| ||| | |||||
Sbjct 717367 CCATGGCACTCAGATATCTTTGATTTCATTGACATCAGAAAGAACCACGGTAAAGAAGAA 717426
Query 75677 GCTCGGTGT-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735
|| | | ||||| | || || | || ||||||||||| | ||||||||| | ||
Sbjct 717427 A-TCAGAGCCAGAGAYTTATTCCCAGCYCTTTGGATTCCAGATTTGTTCATGAAGAGAGT 717485
Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGACG 75794
||| || | | ||| | | |||| ||| || ||| | |||||| | || |
Sbjct 717486 CAAGGCCAATGCTGATTGGACCTTGTTCTCTCCTAGTGAAG-CTCCAGGTTTGAGTGATG 717544
Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATG 75854
| ||||| || || ||| || || | ||||| ||| || |||| |
Sbjct 717545 CTTATGGTGATGAATTCGAAAAGCTTTATGATCAATATGAGTTGGAAGGWAGAGGWAGAA 717604
Query 75855 CGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
||| | | || | | | ||| ||| | || || | || | || || || |||||
Sbjct 717605 AGACCAT-CAAGGCCCAAAAGTTGTGGTACGCCATCTTAGAAGCYCAAACTGAAACTGGT 717663
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
|| |||| || ||||||||||| | |||||||||||| ||||||||||| |||||
Sbjct 717664 ACTCCATTCATTGTTTACAAGGATTCCTGTAACAAGAAGTCCAACCAAAAGAACTTGGGT 717723
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
|| ||||| ||| || | || |||||| | || ||| | ||| | | || ||
Sbjct 717724 ACCATCAARTCCTCCAACTTGTGTTGTGAAATTGTTGAATACTCTGATGAMAAKGAAACT 717783
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA------TGAAG----- 76082
||||| || || ||||| || | ||| | ||| | |||||| |||||
Sbjct 717784 GCTGTYTGTAACTTGGCYTCTGTTGCCTTGCCAGCCTTTGTCAAGGTTTCTGAAGACCAA 717843
Query 76083 -AGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAAT 76141
|||| | |||| ||||| |||| |||||||| || || | || |||| ||
Sbjct 717844 AAGACWCAAACTTATGATTTCCAAAAGCTTCATGATGTCTGTAAAGTCATTGCCAAGAAC 717903
Query 76142 CTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATG 76201
| || || ||||||||||| | || || ||||| ||||| ||| || || |||
Sbjct 717904 TTGAATGCTGTTATTGACAGAAACTACTACCCTGTTGAAACTGCTAGAAGATCCAACATG 717963
Query 76202 CGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC 76261
|||||||||| |||| ||| |||||||||||||| || |||| || || ||| |
Sbjct 717964 AGACACAGACCAATTGCTTTAGGTGTTCAAGGTCTTGCTGATGCYTTCATGATGTTGAGA 718023
Query 76262 TACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTAT 76321
||||||| || || | |||||| | |||| || ||||||||||| || |||
Sbjct 718024 GTTCCATTTGACTCTGAAAAGGCCAAGCAATTGAACATTCAAATCTTTGAAACTATCTAT 718083
Query 76322 CACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTT 76381
||||| | | || || | ||||| ||||| | ||||| |||||| | |
Sbjct 718084 CACGCTGCTTTAGAAGCTTCTACGGAATTAGCTGAGGTTGAAGGTACCTATGCCTCTTAC 718143
Query 76382 GAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTG--AAACCA 76439
|| || || || || |||||||| || | || | || ||| | | || | ||
Sbjct 718144 GAAGGATCACCAGCTTCCCAAGGTGTCTTGCAATACGACTACTGGAAYGTTGCTCCAACA 718203
Query 76440 AGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 76499
| | | | |||||||||| | ||| | || || | ||| | | |||
Sbjct 718204 AACYTA--TGGGACTGGGATGAATTAAAGAAGAAGATTGCCAAGCATGGTTTAAGAAACT 718261
Query 76500 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 76559
| || | || ||||||||||| || ||||| | ||||| | ||| | |||||||
Sbjct 718262 CCTTGTTAGTTGCTCCAATGCCAACTGCTTCCACTTCCCAAATTCTAGGTTACAATGAAT 718321
Query 76560 GCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGA 76611
| || ||||||| ||| | ||||| ||| ||||||||| | | |||||
Sbjct 718322 GTTTCGAACCATTCACTTCCAACATGTACTCCAGAAGAACCTTGTCTGGTGA 718373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569473228960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |