Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq16 167 5e-36 seq14 156 8e-33 seq1 131 3e-25 >seq16 Length=958289 Score = 167 bits (184), Expect = 5e-36 Identities = 179/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || |||||||| | || | || || ||| || || ||||| Sbjct 204395 ACCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGA 204336 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| | || |||||||| |||||||||||||| ||||| |||||||||||||| Sbjct 204335 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 204276 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| |||||||| |||||| || ||| | || || || ||||| || Sbjct 204275 AATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAAC 204216 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGA 192545 ||||| || ||||| ||||| ||||||||||||| ||| || |||||| |||| || Sbjct 204215 TTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATATTTGA 204159 >seq14 Length=450723 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || |||||||| | || | || || ||| || || ||||| Sbjct 422089 ACCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 422148 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| | || || ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct 422149 TAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGG 422208 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| |||||| || ||| | || ||||| || ||||| || Sbjct 422209 GATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGAC 422268 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || | ||||||||| |||||||||| ||||| | || || |||||||| Sbjct 422269 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319 >seq1 Length=232064 Score = 131 bits (144), Expect = 3e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||| ||||||||| | | || |||||||| || || | || || ||| | Sbjct 90795 GTTCAATAACACCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGT 90736 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| || |||| |||| || ||||| ||||||| ||||||||||| |||| Sbjct 90735 TGTARTCAGACAAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTT 90676 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||||||||| || ||||| || ||||| || || || ||| || | || | Sbjct 90675 GATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGG 90616 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 ||||| ||||| | ||||||||| ||||| ||||| || || | ||| Sbjct 90615 TAGATTCGACTTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 90567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479785567950