Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq16 143 5e-29
seq2 138 2e-27
>seq16
Length=958289
Score = 143 bits (158), Expect = 5e-29
Identities = 172/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || |||||||| | || | || || || || || || ||
Sbjct 204395 ACCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGA 204336
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
||| | || |||| |||||||| ||||||||||| || ||||| ||||| ||||||||
Sbjct 204335 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 204276
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| |||||||| |||||| || ||| | || | || ||||| ||
Sbjct 204275 AATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAAC 204216
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075
||||| || ||||| ||||| ||||||||||||| || || |||||| ||||
Sbjct 204215 TTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATATT 204162
>seq2
Length=1277918
Score = 138 bits (152), Expect = 2e-27
Identities = 363/547 (66%), Gaps = 19/547 (3%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||||| ||| | ||||| || ||||| || || || |||| |||||
Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTAT--AATAT-TTTTCTCCTATCAATACATAT 38948
| ||| || ||||||||||| |||| || || || ||||| | ||| | |
Sbjct 605332 TCCATGAAGTCAAATGGATT---GGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACT 605388
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
|| |||||||| || || |||||||| ||||| ||| || ||| ||||||||||||
Sbjct 605389 AACAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAAC 605448
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCt---ttttctatttctacagcttgttta 39065
|| || ||| |||| ||||||| || | | ||||| ||||| ||||||| | |
Sbjct 605449 AAGGCAACTGG-AATG--GCATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAA 605505
Query 39066 attatcataattatattattttttga--taatttatatttaatatgattcgcatataGTA 39123
|| || | | | || ||| || | || | || | || | | | |
Sbjct 605506 ATGAT--TCTYTCAACAATCTTTGGATCTGGCTTGTTCTTCAAGTGR---GAGAACAACA 605560
Query 39124 AACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 39183
|||| ||||| || || |||||||||||||| || | || || || || || || |
Sbjct 605561 AACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCA 605620
Query 39184 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 39243
| || ||||| || ||| |||| || | ||| || || | ||||| | || ||||
Sbjct 605621 AACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGA 605680
Query 39244 ATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTA 39303
| | |||||| ||| || || || | | |||| | |||||| | | |||
Sbjct 605681 AGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTT 605740
Query 39304 AAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTT 39363
||||| | |||||||| || || |||| ||||| ||| || ||||||| || |
Sbjct 605741 GGATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCAT 605800
Query 39364 TAAATAA 39370
| |||||
Sbjct 605801 TGAATAA 605807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135807658600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |