Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq16 143 5e-29 seq2 138 2e-27 >seq16 Length=958289 Score = 143 bits (158), Expect = 5e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || |||||||| | || | || || || || || || || Sbjct 204395 ACCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGA 204336 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | || |||| |||||||| ||||||||||| || ||||| ||||| |||||||| Sbjct 204335 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 204276 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| |||||||| |||||| || ||| | || | || ||||| || Sbjct 204275 AATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAAC 204216 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 ||||| || ||||| ||||| ||||||||||||| || || |||||| |||| Sbjct 204215 TTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATATT 204162 >seq2 Length=1277918 Score = 138 bits (152), Expect = 2e-27 Identities = 363/547 (66%), Gaps = 19/547 (3%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| ||||| ||| | ||||| || ||||| || || || |||| ||||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTAT--AATAT-TTTTCTCCTATCAATACATAT 38948 | ||| || ||||||||||| |||| || || || ||||| | ||| | | Sbjct 605332 TCCATGAAGTCAAATGGATT---GGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACT 605388 Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008 || |||||||| || || |||||||| ||||| ||| || ||| |||||||||||| Sbjct 605389 AACAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAAC 605448 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCt---ttttctatttctacagcttgttta 39065 || || ||| |||| ||||||| || | | ||||| ||||| ||||||| | | Sbjct 605449 AAGGCAACTGG-AATG--GCATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAA 605505 Query 39066 attatcataattatattattttttga--taatttatatttaatatgattcgcatataGTA 39123 || || | | | || ||| || | || | || | || | | | | Sbjct 605506 ATGAT--TCTYTCAACAATCTTTGGATCTGGCTTGTTCTTCAAGTGR---GAGAACAACA 605560 Query 39124 AACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 39183 |||| ||||| || || |||||||||||||| || | || || || || || || | Sbjct 605561 AACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCA 605620 Query 39184 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 39243 | || ||||| || ||| |||| || | ||| || || | ||||| | || |||| Sbjct 605621 AACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGA 605680 Query 39244 ATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTA 39303 | | |||||| ||| || || || | | |||| | |||||| | | ||| Sbjct 605681 AGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTT 605740 Query 39304 AAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTT 39363 ||||| | |||||||| || || |||| ||||| ||| || ||||||| || | Sbjct 605741 GGATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCAT 605800 Query 39364 TAAATAA 39370 | ||||| Sbjct 605801 TGAATAA 605807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135807658600