Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11 192 2e-43 seq17 114 4e-20 >seq11 Length=1501259 Score = 192 bits (212), Expect = 2e-43 Identities = 483/734 (66%), Gaps = 5/734 (1%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| ||| |||| ||||| || ||||| || || || || |||||| ||||| |||| Sbjct 717808 CAACAGARGCCAAGTTACARACAGCAGTTTCMTTKTCATCAGAGTATTCAACAATTTCAC 717749 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | |||| ||| || |||||||| || || ||||| ||||| || || ||||||| | Sbjct 717748 AACACAAGTTGGAGGAYTTGATGGTACCCAAGTTCTTTTGGTTGGACTTCTTGTTACAGG 717689 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 ||||||||| | |||| |||| || || || || | || || || | || || Sbjct 717688 AATCCTTGTAAACAATGAATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGCGTACC 717629 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACA 155826 | | | |||| || || ||| | ||| |||||| ||||||||| ||| | Sbjct 717628 ACAACTTTTGGGCCTTGATGGTCTTTCTWCCTCTWCCTTCCAACTCATATTGATCATAAA 717569 Query 155827 GCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 || || | | || ||||| ||| |||||||| || || | | || | |||| Sbjct 717568 GCTTTTCGAATTCATCACCATAAGCATCACTCAAACCTGGAGCTTCACTAGGAGAGAACA 717509 Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 | |||| ||| | | || | || ||| || | ||| ||||| || Sbjct 717508 AGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGRGCTG 717449 Query 155947 AGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTAGCTCTAAGAAT 156005 ||| | || || || | ||| | || | | ||||| ||||| | | || | ||| Sbjct 717448 GGAATAARTCTCTGGC-TCTGATTTCTTCTTTACCGTGGTTCTTTCTGATGTCAATGAAA 717390 Query 156006 TCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG--- 156062 || ||||| | || ||| |||| |||| ||||| ||| |||||| Sbjct 717389 TCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAGGCAAAGGCACCTGGTCTCTTGTTA 717330 Query 156063 CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCA 156122 ||||| ||||| ||||| | || || || |||||||| | | ||||||||| | |||| Sbjct 717329 CCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAACCA 717270 Query 156123 TTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGT 156182 |||||||| || ||||| || ||| | ||||||| || | | || || || || Sbjct 717269 TTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATGTGC 717210 Query 156183 AGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATA 156242 | ||||||||||| | || || |||||||| |||||||| | || | | | ||| Sbjct 717209 AAACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTAGATA 717150 Query 156243 CCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGT 156302 || ||||| || || || | |||||||| | | || || | |||||||| ||| Sbjct 717149 CCGTCAATGGAGTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCTTGGA 717090 Query 156303 GTTCCAGCGTTGAA 156316 || || || ||||| Sbjct 717089 GTACCGGCATTGAA 717076 Score = 98.7 bits (108), Expect = 3e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 301854 CTTGGACGCAACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACC 301913 |||||| |||||||| ||||| ||||||||||||| ||| | ||| |||| || ||||| Sbjct 513490 CTTGGAGGCAACACCGGCAAAATGGAAAGTATTCAAAGTCATTTGGGTAGCAGGTTCACC 513549 Query 301914 AATACTTTGTGCCGCAATCATACCAACCATTTCTCCTGGTGCTACAATAGACTT 301967 ||| ||| || || | | |||||||||||| ||||| ||||||||||| Sbjct 513550 AATGGATTGCGCAGCCAAAACACCAACCATTTCACCTGGATGAACAATAGACTT 513603 Score = 86.0 bits (94), Expect = 2e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| || || || ||||| |||||||||| ||| | | ||||||| Sbjct 514253 TGAATATAACCGGTTTCAGCAGTCTTAACAGCAGTATCAATTAAACCTTCTCTACCACCC 514312 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 || ||||||||||| | ||||| || ||| || | | | | ||| ||||||| ||| Sbjct 514313 ATTGCATGGAAGAAAAACTCTTGAGGAGTTAGACCTCTTAAATAAGAGTTCTCAACAAAA 514372 Query 302719 CC 302720 || Sbjct 514373 CC 514374 >seq17 Length=1055512 Score = 114 bits (126), Expect = 4e-20 Identities = 250/365 (68%), Gaps = 16/365 (4%) Strand=Plus/Plus Query 380907 AGAACTACTATGGTTTATTAAGGGTGATAC-ATCAAACAGAAGGCTAAAGGCACAGAATG 380965 ||||||||||||||| ||||||||||| || | ||| |||| ||| || | |||| | Sbjct 816547 AGAACTACTATGGTTCATTAAGGGTGACACCAACAACAAGAAT-CTACAG--AAAGAAGG 816603 Query 380966 --TAAAAATCTGGAATGGTAATGGTAGTCGTGAGTTTTTAGATTCCCGTGGTCTAACCAA 381023 | ||||||||| ||||||||||| ||||||| | ||||||| | ||| | ||| | Sbjct 816604 CGTTAAAATCTGGGATGGTAATGGTTCCCGTGAGTATCTAGATTCTCTTGGATTGACCGA 816663 Query 381024 TAACGAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAACGCCGA 381083 || || |||| || || || || | ||||| || || |||||||| ||| || || Sbjct 816664 TAGAGAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAATGGAGACACTTTGGTGCTGA 816723 Query 381084 TTATGATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAGTTAAAATATATCAT 381143 |||| | || | | || || || || ||||| |||||| | | | ||||| Sbjct 816724 GTATGTGGACTGCCACACAGACTACACCGGCAAGGGATACGACCAACTGAGTGAGATCAT 816783 Query 381144 AGACCAGCTAAAAAATCCTGAAACAAGAAATTCACGCCGACTAATTATGACTGCGTGGAA 381203 || ||||||| | || ||| | || | || | || ||| |||||||||| Sbjct 816784 CCACAAGCTAAAGA--CC---AACCCATACGACA-GAAGAATCATCATGTCTGCGTGGAA 816837 Query 381204 TCCTTGCCAGA--TTAATGATATGGCTTTACCACCTTGCCATATTTTATGCCAGTTCAAT 381261 ||| ||||| | || | ||||| | || || ||||| | || ||||||||| | Sbjct 816838 CCCT--CCAGACTTCAAGAAAATGGCCCTTCCCCCATGCCACGTCTTTTGCCAGTTCTAC 816895 Query 381262 GTTTC 381266 || || Sbjct 816896 GTGTC 816900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817279419729