Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq16 123 2e-23 seq1 105 6e-18 seq14 91.5 1e-13 >seq16 Length=958289 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| |||||||||| || || || | ||||| ||| | | Sbjct 204168 ATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTTGAATCTAGT 204227 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | | || | || || || |||||||| || ||||| || || || |||||| Sbjct 204228 GACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAA 204287 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||||| || || || |||| || |||| | | || || || ||| Sbjct 204288 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTACAAC 204347 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || ||||||||||| ||||| || || || ||| |||| Sbjct 204348 ATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATT 204385 >seq1 Length=232064 Score = 105 bits (116), Expect = 6e-18 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772 ||| | || || |||||||||| || ||||| | ||||| ||| | ||||| || | Sbjct 90567 TTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCATC 90626 Query 24773 GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832 || | || || |||||||||||||| ||||| || || || ||||||||| | || Sbjct 90627 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90686 Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892 ||||| | || || || | || ||| |||| |||| || || ||||| |||||| Sbjct 90687 ATCTTCTCTGGTAAGCAATTAGAAGATGGCAGAACTTTGTCTGAYTACAACATCCAAAAG 90746 Query 24893 GAATCGACACTACACTTGGT 24912 ||||| ||| | || || || Sbjct 90747 GAATCAACATTGCATTTAGT 90766 >seq14 Length=450723 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| ||||| ||||| || ||||| | || || ||| | | Sbjct 422316 ATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTCT 422257 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | | || | || || || ||||||||||||||||| || || || || ||| Sbjct 422256 GATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAGCAA 422197 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || ||||| || || || || | || || |||| | || || || ||| Sbjct 422196 CAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTACAAC 422137 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || ||||||||||| || || || || || ||| |||| Sbjct 422136 ATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATT 422099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897504396760