Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq16 114 1e-20
seq14 104 2e-17
>seq16
Length=958289
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || || ||||| || || ||||| ||||| ||||| || || |
Sbjct 204394 CCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGAT 204335
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| ||||| || |||
Sbjct 204334 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 204275
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | ||| || |||| || | | |||| | ||| |||
Sbjct 204274 ATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACT 204215
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790
|| | || || || || || ||||| ||||||||||| || |||||| ||
Sbjct 204214 TCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATA 204164
>seq14
Length=450723
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || || ||||| || |||||||| ||||| ||||| || || |
Sbjct 422090 CCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 422149
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || ||||| | || |||||||| || || || ||
Sbjct 422150 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 422209
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| ||||||||||| | ||| || ||| | || | | |||||| ||| ||
Sbjct 422210 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACC 422269
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | ||| || || || ||||||| ||||| || || || ||||||||
Sbjct 422270 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219120187397
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |