Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq16 178 3e-39 seq14 165 2e-35 seq1 158 2e-33 >seq16 Length=958289 Score = 178 bits (196), Expect = 3e-39 Identities = 185/243 (76%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 82571 CATTTATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTAT 82630 ||||||| | | ||| ||||| || | || |||||| || || || ||||| || || || Sbjct 204407 CATTTATAAGCAACCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGAT 204348 Query 82631 ATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTG 82690 || || ||||||| ||||||||||||| | ||| || ||||||||||| | |||||| Sbjct 204347 GTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTG 204288 Query 82691 TTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 |||||| || || || |||||||||||||| || || | || ||| ||||| | || Sbjct 204287 TTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTC 204228 Query 82751 ATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||| ||| ||||| || || || ||||| || || || || || ||||| || ||||| Sbjct 204227 ACTAGATTCAACTTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCAT 204168 Query 82811 TAT 82813 ||| Sbjct 204167 TAT 204165 >seq14 Length=450723 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | || ||||| ||||| || ||||| || || || || || ||||| Sbjct 422089 ACCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 422148 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | ||||||||||||||| ||| || ||||| ||||||| ||||||||| || || || Sbjct 422149 TAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGG 422208 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || ||||| || || || || ||| | || || | |||| || ||| || Sbjct 422209 GATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGAC 422268 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || ||||| || || | || ||||| || || |||||| Sbjct 422269 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATT 422317 >seq1 Length=232064 Score = 158 bits (174), Expect = 2e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | || ||||| |||| || ||||| || || || || || ||||| Sbjct 90785 ACCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGA 90726 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | |||| || ||||||| ||| || |||| ||||||| |||||||||||| || || Sbjct 90725 CAAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGG 90666 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| ||||| || || ||| || || || || ||| ||| || Sbjct 90665 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGAC 90606 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 ||||||||| || ||||| || || || ||||| ||||| Sbjct 90605 TTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 90567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826986145763