Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq11 132 1e-25
seq2 114 3e-20
>seq11
Length=1501259
Score = 132 bits (146), Expect = 1e-25
Identities = 389/596 (65%), Gaps = 17/596 (3%)
Strand=Plus/Plus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| ||||||||||| || | ||| | ||||| || | |||| || |||||
Sbjct 716891 ACTACTTTGGTTTCAAGACCTTGGAAAGATCTTATCTATTGAAGATCAACGGTAAGATCG 716950
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||||| | || |||||| || | | | ||||| |||||||||| || | | ||
Sbjct 716951 TTGAAAGACCGCAACACTTGATCATGAGAGTTGCTGTTGGTATTCACGGTGAAAACATCG 717010
Query 110422 AAGCTGTTATTGAATGTTA-----TGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTA 110475
| || |||||| ||| |||||| | || ||| | | | || ||
Sbjct 717011 ACAAAGTCATTGAAACTTACAACTTGATGTCTCAA------AGATACTTCACCCACGCCT 717064
Query 110476 CTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TA 110534
|||| || | || || || || ||| || ||| || | ||||| |||||| ||
Sbjct 717065 CTCCAACTTTGTTCAATGCCGGTACTCCAAGACCTCAAATGTCCTCTTG-TTTCTTGGTA 717123
Query 110535 GGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATT 110594
||| || || || || ||||| ||||| || || | | || ||| ||||| ||
Sbjct 717124 TCAATGAAGGACGACTCCATTGACGGTATCTACGACACCTTGAAGGAATGTGCTCAAATC 717183
Query 110595 TCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAAT 110654
|| || | |||| || |||||| | ||| | || | || | || | || | |
Sbjct 717184 TCCAAGACTGCTGGTGGTATTGGTTTGCACATCCACAACATCAGATCCACTGGTTCTTAC 717243
Query 110655 ATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGAC 110714
|| ||| | || ||| |||| | ||| | |||| ||| | |||||||||||| ||
Sbjct 717244 ATTGCAGGTACCAACGGTACTTCCAATGGTTTGATTCCTATGGTCAGAGTCTTCAACAAC 717303
Query 110715 ACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTC 110771
|| || | |||||| ||||||||||| |||||| || | ||||| | || |
Sbjct 717304 ACCGCCAGATATGTTGATCAAGGTGGTAACAAGAGACCAGGTGCCTTTGCCTTGTACTTG 717363
Query 110772 GAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAA 110831
||||| ||||| |||||||| ||||| ||| | || | | || || || || |||
Sbjct 717364 GAACCATGGCACTCAGATATCTTTGATTTCATTGACATCAGAAAGAACCACGGTAAAGAA 717423
Query 110832 GAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAA 110887
||| ||||| | || ||||| || | |||||| ||||||| ||||||||
Sbjct 717424 GAAATCAGAGCCAGAGAYTTATTCCCAGCYCTTTGGATTCCAGATTTGTTCATGAA 717479
Score = 114 bits (126), Expect = 3e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
||||| ||||| || ||||| ||| ||||||||||||| |||||||| |||| |||||||
Sbjct 515442 GTTCTTTTCAACAGACAACCTTCATTGCATAAAATGTCCATGATGGCGCATAGAGTCAAA 515383
Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449
|| | || | ||||| ||||||| || || | | | || |||||||| |||
Sbjct 515382 GTCATGCCTTATTCTACATTCAGATTAAACTTATCTGTTACTTCTCCATATAATGCTGAT 515323
Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
|| ||||| |||||||||||| | || || || |||
Sbjct 515322 TTCGATGGTGATGAAATGAATTTACACGTTCCACAA 515287
>seq2
Length=1277918
Score = 114 bits (126), Expect = 3e-20
Identities = 266/396 (67%), Gaps = 14/396 (4%)
Strand=Plus/Minus
Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846
|||||| ||| || | || || |||||||| || | |||||| ||||| | |||
Sbjct 605785 TTCCTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCCAAGACAAGGACGCCC 605726
Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906
||| || |||||| || ||||| ||| |||||| ||| | ||||| || || | |
Sbjct 605725 TGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCCGGATCAT 605666
Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966
| ||||||||| ||| | |||||| || ||||||||||| | | || |||||
Sbjct 605665 TTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTGACCTTCTCCAACG 605606
Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC---TATATTAATCTATAGAA 132023
| || |||| ||||| |||| || || ||||| ||||| | | || |||
Sbjct 605605 AGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTTTGTTGTTCTCY---- 605550
Query 132024 AATTTGCTG-ATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGAT 132082
| ||| | | || | ||| ||| | | || | | | || ||||| |||||
Sbjct 605549 CACTTGAAGAACAAGCCAGATCCAAAGATTGTTGARAGAATCATTTCAGAAGCTGTTGAA 605490
Query 132083 ATCGAGAAGGAGTTTATT-ACAGAAGCTTTGCC--TTGCAATTTGATTGGGATGAATGCT 132139
|| || || ||| | || | || || | || |||| ||| | || |||||||||
Sbjct 605489 ATYGA-AAAGAGATACTTCATTGATGCCATTCCAGTTGC--CTTGTTGGGTATGAATGCT 605433
Query 132140 GACTCTATGAAGGAGTACATTGAATTCGTTGCTGAT 132175
|||| ||||| | ||| |||||||||||||||||
Sbjct 605432 GACTTGATGAACCAATACGTTGAATTCGTTGCTGAT 605397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |