Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq16 114 1e-20 seq14 109 4e-19 >seq16 Length=958289 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||||||||||||||| || || |||||||| ||| | ||| ||| | | Sbjct 204167 AATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTTGAATCTAG 204226 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || || ||| || || ||||| || || ||||| | || |||||| Sbjct 204227 TGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCTGATCA 204286 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||| | || | ||| || || ||||| ||||| || ||| | || ||||| Sbjct 204287 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTACAA 204346 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| ||||| ||||| ||||| |||||||| ||||| ||| |||| || Sbjct 204347 CATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGAGGTGG 204394 >seq14 Length=450723 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||||||||| || ||||| | ||||| ||||||||||| |||| ||| | Sbjct 422319 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 422260 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||||| | | | || || ||||| ||||||||||| | || ||| Sbjct 422259 TCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 422200 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | || || || ||||||||||| || |||| | || ||| Sbjct 422199 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTAC 422140 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||||| || || |||||||| ||||| ||| |||| || Sbjct 422139 AACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGG 422090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329516642336