Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq11 367 2e-96 seq2 192 8e-44 >seq11 Length=1501259 Score = 367 bits (406), Expect = 2e-96 Identities = 1441/2245 (64%), Gaps = 52/2245 (2%) Strand=Plus/Minus Query 68370 CAATG-TAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 ||||| | || ||||||| | || || | || ||| | | ||| |||||||| || | Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| || |||||| |||||||| ||||| || | || ||||| | Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613 Query 68489 CTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT 68548 || || || ||||| || ||| |||||| ||||| ||| |||||| || ||||| | Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553 Query 68549 TTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTG 68608 || || ||||||||| | |||||||| |||||| | | | || || || | || Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTCCTTCATTTCTTGTG 718493 Query 68609 GAAGGCTCG-TA--TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCAT 68665 | | | | | || | ||| ||||| || | || || || | ||| || | | Sbjct 718492 GGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCTT 718433 Query 68666 CATTCCACAATTTTC-TCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAAT 68724 ||| ||| ||| | | || |||| | | | | | |||||||| ||||| || Sbjct 718432 CATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTAT 718374 Query 68725 TCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTA 68784 || ||||| || ||| | | ||| || || || ||||||| | | ||||||| Sbjct 718373 TCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTG 718314 Query 68785 TTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTA 68844 | || |||||||| | ||| || ||||||||||| || || || || || ||||| Sbjct 718313 TAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTT 718254 Query 68845 AGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACA 68904 | |||||| | || || | |||| | | ||| ||||| | | | ||| || Sbjct 718253 AAACCATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGAGCA 718194 Query 68905 ACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCA 68964 || ||||| |||||||| | | || | || |||||| | || | || Sbjct 718193 ACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGGCA 718134 Query 68965 TAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTT 69024 || | ||||| ||||||| ||| | || ||||| ||| ||| ||| || ||| Sbjct 718133 TAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAGTT 718074 Query 69025 TCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCT-AGACTATCGAATGGATAATGTAAA- 69081 || || || | | || | | |||| ||| | ||| | | |||||| | | | || Sbjct 718073 TCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGT--CAAATGGA-ACTCTCAAC 718017 Query 69082 AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTT 69141 | || || ||||| || | || ||||| || | | | || ||||| |||||| | || Sbjct 718016 ATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGTTG 717957 Query 69142 GAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGATTTCG 69200 || ||| ||| | || ||| || || || | || |||| ||| ||| | | | Sbjct 717956 GATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCTTG 717897 Query 69201 GACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA----------------TC 69244 | | | |||||| || || | || || | |||||| | || Sbjct 717896 G-CAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGTC 717838 Query 69245 GTCC--ATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTC 69302 || | | | ||||| || || ||||| || | ||||| || || || Sbjct 717837 TTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTTC 717778 Query 69303 ATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAG 69362 || || | |||| | || || ||| | || | ||||| || |||| Sbjct 717777 MTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCAA 717718 Query 69363 ATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGT 69422 || | || || ||| |||||||||| |||||||||| ||| || ||||||||||| Sbjct 717717 GTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAGT 717658 Query 69423 TTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAG--CATTTATTACGGTCTTG 69480 |||| | || | ||| | || | | ||| | || | | | || || |||||| Sbjct 717657 TTCAGTTTGRGCTTCTAAGATGGCGTACCACA--ACTTTTGGGCCTTGAT---GGTCTTT 717603 Query 69481 -TAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA 69537 | | || | || |||||||| ||| ||| |||||||||||| || || || Sbjct 717602 CTWCCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCA 717543 Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597 ||| ||| || ||| |||| | ||| | | ||| | ||| || ||| |||| ||| Sbjct 717542 TCACTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACT 717483 Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657 | ||||| || | ||| ||||||||||| ||| || | ||||||| ||| ||||| Sbjct 717482 CTCTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCT 717423 Query 69658 TCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 69717 || || || || ||| | | || | || || | ||||| || ||||||||||| Sbjct 717422 TCTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCC 717363 Query 69718 AGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTG 69777 | || | || | | | || |||| || || || || ||||| | |||||||| ||| Sbjct 717362 AAGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTG 717303 Query 69778 TTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATA 69837 || || ||||||| | ||| ||||| | |||||| || |||| || || || | ||| Sbjct 717302 TTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATG 717243 Query 69838 TAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAG 69897 ||| || | | | || || || | ||| || || || || | || ||| Sbjct 717242 TAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAG 717183 Query 69898 ATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-TGTT 69956 ||| ||||||| ||||| ||||| || ||||| || ||| || || ||| || | Sbjct 717182 ATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGAT 717123 Query 69957 AAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGA 70016 | ||| ||||| ||||||||| | | ||| || ||||| || || || ||||| Sbjct 717122 ACCAAG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGA 717064 Query 70017 TGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTAT-AT 70075 ||||| ||||| || ||| ||| | || ||||| |||||||| || || || | Sbjct 717063 GGCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTT 717004 Query 70076 CCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTT 70135 ||| | ||||| || | || || | ||| | || || || |||| ||| || | | Sbjct 717003 TTCACCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCT 716945 Query 70136 TATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATG 70195 || || || ||||| || || ||| |||||| || || || ||||| |||||||| Sbjct 716944 TACCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGT 716885 Query 70196 AAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATAT 70255 |||||||| ||| | || || ||| || || | ||||||| ||| | || | | Sbjct 716884 TGAAGTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGACAGTTT 716825 Query 70256 CCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGA 70315 | ||| | || || || || || ||| ||| | ||||| |||||| Sbjct 716824 CGTAAACGTCATCAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGTTGT 716765 Query 70316 ATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGG 70375 |||| ||||| || || | | ||| ||||||| |||| |||||| | || |||| Sbjct 716764 ATAAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGATGG 716705 Query 70376 CTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTA-TT 70434 | |||||||| || |||| ||| || |||||||| || || || |||| | | | Sbjct 716704 CAATTCTGGCAGCAAGAACAGCGTAATCAGGATGGACAGTGGT-CATGTAGGCACAAGTC 716646 Query 70435 TCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACT 70494 || |||||||| | |||||||| || || | ||| || | || | || ||| | | Sbjct 716645 TCAGCAGCTAAGTTGTCTAATTCGATGGTAGAAACACCTTCGTAGACACCGGTAATGATT 716586 Query 70495 TTCATGGCTATTTTGATAGGATCTATGAATTCT--GTGTTCAGACCATAACATAATTTTC 70552 | || || |||| ||| || || || || | || | ||| ||||||| | | Sbjct 716585 CTTTGGGTGATCTTGACAGGGTCGAT--ATGCTTAGAGTCTAAACCGTAACATAGTCTGG 716528 Query 70553 TAATACGAGATGTAATTTTATCAAA 70577 ||| | || || ||||||||||| Sbjct 716527 CAATTCTGGAAGTGATTTTATCAAA 716503 >seq2 Length=1277918 Score = 192 bits (212), Expect = 8e-44 Identities = 576/884 (65%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| || | || || || || || || || || | || ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| ||||| ||||| || |||| | | |||| | || || | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 |||||||| ||||| ||||| | |||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 39506 TTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 |||||| | || || | | | | ||||||| | || || || || |||| || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTTTT-CRATTTCAACAGCTTCTGAAATGAT 605510 Query 39565 CGATGTTACTACCTCATCA-CTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 || | || | || | | | | | || || |||| || ||||| | Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGGCAA 605569 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 ||||| |||| || || ||||| | || || ||||| || || || | ||||||| Sbjct 605570 AGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCA 605629 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 | | ||| ||| || | ||| || || |||||||| ||||| || ||||||| || | Sbjct 605630 TCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCT 605689 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCA-C 39799 | || || || || ||||| ||||| || | | | || || | | ||||| | Sbjct 605690 CAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATC 605749 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 39859 | || ||||| || || || | ||| | ||| || |||||||| ||||| || | Sbjct 605750 TGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAG 605808 Query 39860 TAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAA 39919 | | ||||| | | || || | ||||| || | || | || ||||||| Sbjct 605809 AATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAG 605868 Query 39920 TGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC 39979 ||||||||||| ||| || || || || || ||||| | ||||| | |||||| || Sbjct 605869 TGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACY 605928 Query 39980 TCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAAT 40039 || | | | || |||| |||| || || || || || |||||| || ||||| || Sbjct 605929 TCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAG 605988 Query 40040 GCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTG 40096 ||||| || |||||| || |||| | ||| | || |||||||||| Sbjct 605989 GCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATGT 606048 Query 40097 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTAC 40156 | ||| || || | ||| | ||||||||||||||| || || || || || | || || Sbjct 606049 AAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATAR 606108 Query 40157 ATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 | ||| || ||| | | | ||||| || | |||||||| Sbjct 606109 GCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908654031880