Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 167 2e-36
>seq2
Length=1277918
Score = 167 bits (184), Expect = 2e-36
Identities = 397/604 (66%), Gaps = 22/604 (4%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| |||||| |||| ||||| | | | ||| || ||| || || || | ||| |
Sbjct 606152 AGATTTGTCTTGTTCCCAATCAAGTTCCCTGAAATTTGGGAAGCYTATAAGAGAGCCGAA 606093
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTA--------GCACATT 43808
|| || || |||||||| |||||| |||||||| | || || ||| | |||
Sbjct 606092 GCTTCTTTCTGGACAGCTGAAGAAATTGATTTGTCCAAGGATTTACATGACTGGAACAAC 606033
Query 43809 GGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTG 43868
|| || || ||||| |||| | ||||| || || ||||| || |||||||
Sbjct 606032 AGAATGAATGAAAAC-----GAAAGATTCTTTATTTCYAGAGTKTTGGCCTTCTTTGCTG 605978
Query 43869 CGAGCGACGGGATAGTCAATGAAAATTTGGTT---AGTCGGTTTGCGCAAGAAGTTCAAT 43925
| || || || ||||| || || |||||| | | | ||| || || |||
Sbjct 605977 CCTCTGATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTCTCTGCT---GARGTYCAAA 605921
Query 43926 TACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAA 43985
| |||||||| ||||| || || || ||||| || ||||| || || || ||||
Sbjct 605920 TTCCAGAAGCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAAAACATCCACTCAGAAA 605861
Query 43986 TGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTA 44045
||| | || | || || |||||||| || | || || | || || |
Sbjct 605860 CCTACTCCTTATTGTTGGACACATACATCAAGGACMCTAAGGAAAACGAATTCTTATTCA 605801
Query 44046 ATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA 44105
|||| |||||||| | |||| || || | || || || |||||| | | ||||||
Sbjct 605800 ATGCCATAGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCC 605741
Query 44106 ATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162
| || || | |||| ||| |||| || || || || | ||| || || | |
Sbjct 605740 AAGACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCT 605681
Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222
|||| || ||||| ||||| || || || ||||| ||||| ||||||||||||||| |
Sbjct 605680 TCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTT 605621
Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCT 44282
|||| || || || ||||| || | | || ||||| ||||| || ||||| || |
Sbjct 605620 TGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTT 605561
Query 44283 TGTT 44286
||||
Sbjct 605560 TGTT 605557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455917652085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |