Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 167 2e-36 >seq2 Length=1277918 Score = 167 bits (184), Expect = 2e-36 Identities = 397/604 (66%), Gaps = 22/604 (4%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || |||||| |||| ||||| | | | ||| || ||| || || || | ||| | Sbjct 606152 AGATTTGTCTTGTTCCCAATCAAGTTCCCTGAAATTTGGGAAGCYTATAAGAGAGCCGAA 606093 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTA--------GCACATT 43808 || || || |||||||| |||||| |||||||| | || || ||| | ||| Sbjct 606092 GCTTCTTTCTGGACAGCTGAAGAAATTGATTTGTCCAAGGATTTACATGACTGGAACAAC 606033 Query 43809 GGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTG 43868 || || || ||||| |||| | ||||| || || ||||| || ||||||| Sbjct 606032 AGAATGAATGAAAAC-----GAAAGATTCTTTATTTCYAGAGTKTTGGCCTTCTTTGCTG 605978 Query 43869 CGAGCGACGGGATAGTCAATGAAAATTTGGTT---AGTCGGTTTGCGCAAGAAGTTCAAT 43925 | || || || ||||| || || |||||| | | | ||| || || ||| Sbjct 605977 CCTCTGATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTCTCTGCT---GARGTYCAAA 605921 Query 43926 TACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAA 43985 | |||||||| ||||| || || || ||||| || ||||| || || || |||| Sbjct 605920 TTCCAGAAGCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAAAACATCCACTCAGAAA 605861 Query 43986 TGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTA 44045 ||| | || | || || |||||||| || | || || | || || | Sbjct 605860 CCTACTCCTTATTGTTGGACACATACATCAAGGACMCTAAGGAAAACGAATTCTTATTCA 605801 Query 44046 ATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA 44105 |||| |||||||| | |||| || || | || || || |||||| | | |||||| Sbjct 605800 ATGCCATAGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCC 605741 Query 44106 ATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162 | || || | |||| ||| |||| || || || || | ||| || || | | Sbjct 605740 AAGACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCT 605681 Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222 |||| || ||||| ||||| || || || ||||| ||||| ||||||||||||||| | Sbjct 605680 TCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTT 605621 Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCT 44282 |||| || || || ||||| || | | || ||||| ||||| || ||||| || | Sbjct 605620 TGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTT 605561 Query 44283 TGTT 44286 |||| Sbjct 605560 TGTT 605557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455917652085