Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq11 316 3e-81
>seq11
Length=1501259
Score = 316 bits (350), Expect = 3e-81
Identities = 972/1493 (65%), Gaps = 39/1493 (3%)
Strand=Plus/Minus
Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743
||||| | | ||||||||| ||| ||||| | ||| ||||||| || ||||||||
Sbjct 718373 TCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTG 718314
Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803
| ||| | ||||| | ||||| || ||||||||||| || | || | ||| |
Sbjct 718313 TAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTT 718254
Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-- 110861
| ||| | || || | ||| | |||||||||| | | | ||| |
Sbjct 718253 AAACCATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCA--TARGTTTGTTGGAG 718196
Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921
|| | | ||| ||| | || | || |||||||| || || || || || | |
Sbjct 718195 CAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGG 718136
Query 110922 CATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGG 110981
|||||| ||||| | ||||| ||||| || || | | |||||||| || |
Sbjct 718135 CATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAG 718076
Query 110982 TTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACA 111041
|||||||||| || |||| | |||||| | || || ||||||| | |||
Sbjct 718075 TTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGTCAAATGGAACTCTCAACA 718016
Query 111042 AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG 111101
|| || |||| || |||||||||||||| ||| |||| |||||||||| ||| || |
Sbjct 718015 TCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGTTGG 717956
Query 111102 ACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGG 111161
| ||| ||||| ||||| || || | ||||||||||| || || | || ||||
Sbjct 717955 ATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGG 717896
Query 111162 TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC------TCTT 111215
|| | || || |||||||| |||| ||||| |||| | ||| ||||
Sbjct 717895 CAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTT 717836
Query 111216 CA------TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269
|| |||||| | ||| | ||| | || ||||| || || ||||| || || |
Sbjct 717835 CAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTTCMT 717776
Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329
| ||| | ||| || | |||||| ||| |||||||| || || || ||||| |
Sbjct 717775 TKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCAAGT 717716
Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389
|||||||||| ||||||||| || | ||||||||| | ||| | || || || || |
Sbjct 717715 TCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAGTTT 717656
Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT---TG 111445
| || || | || | || || | ||| ||| | | | || | |||| | |
Sbjct 717655 CAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTG----ATGGTCTTTCTW 717600
Query 111446 GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCG 111505
| | || ||| ||| || | || || ||| || || ||||| || ||
Sbjct 717599 CCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATCA 717540
Query 111506 GAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCG 111564
| |||||| | ||| || ||| |||| | | ||| | | || ||| || |
Sbjct 717539 CTCAAACCTGGAG-CTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCT 717481
Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTT 111623
||||||||| | ||||||||||| || | || || | ||||| | | || ||||
Sbjct 717480 CTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGA-TTTCTT 717422
Query 111624 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 111683
| | ||| ||||| || | |||| ||| || | |||||| | ||||||||| || |
Sbjct 717421 CTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCA 717362
Query 111684 GATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTG 111739
|| | || | | || || | | ||| |||||| ||||| | || |||
Sbjct 717361 AGTACAAGGCAAAGGCACCTGGTCTCTTG-TTACCACCTTGATCAACATATCTGGCGGTG 717303
Query 111740 GCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATA 111799
||| || || | | ||| ||||| | ||||| || ||| || || || |||
Sbjct 717302 TTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATG 717243
Query 111800 CGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAG 111859
||| | ||| ||| | | |||||||||| |||||||| ||||| ||| |||
Sbjct 717242 TAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAG 717183
Query 111860 ATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCG 111919
||||| ||||| ||| | | || | |||||||||| || ||||| ||||| | |
Sbjct 717182 ATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGAT 717123
Query 111920 ATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTT 111979
| | ||| ||| |||||| || |||||||| ||||| |||||||| | ||||| |
Sbjct 717122 ACCAAGAAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAG 717063
Query 111980 GCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039
||||| |||| | ||| |||||| || ||| || || | ||| || |||| |
Sbjct 717062 GCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTT 717003
Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATG 112099
|| ||||| || || | || || | ||||| || || || || |||| | || |
Sbjct 717002 TCACCGTGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTA 716943
Query 112100 CCATCGAGCCGTTGA--AGAT-AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
|| | || | || | |||| || |||| || | ||| |||| |||||||||
Sbjct 716942 CCGTTGATC--TTCAATAGATAAGATCTT-TCCAAGGTCTTGAAACCAAAGTA 716893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031866543200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |