Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq11 316 3e-81 >seq11 Length=1501259 Score = 316 bits (350), Expect = 3e-81 Identities = 972/1493 (65%), Gaps = 39/1493 (3%) Strand=Plus/Minus Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743 ||||| | | ||||||||| ||| ||||| | ||| ||||||| || |||||||| Sbjct 718373 TCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTG 718314 Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803 | ||| | ||||| | ||||| || ||||||||||| || | || | ||| | Sbjct 718313 TAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTT 718254 Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-- 110861 | ||| | || || | ||| | |||||||||| | | | ||| | Sbjct 718253 AAACCATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCA--TARGTTTGTTGGAG 718196 Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921 || | | ||| ||| | || | || |||||||| || || || || || | | Sbjct 718195 CAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGG 718136 Query 110922 CATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGG 110981 |||||| ||||| | ||||| ||||| || || | | |||||||| || | Sbjct 718135 CATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAG 718076 Query 110982 TTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACA 111041 |||||||||| || |||| | |||||| | || || ||||||| | ||| Sbjct 718075 TTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGTCAAATGGAACTCTCAACA 718016 Query 111042 AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG 111101 || || |||| || |||||||||||||| ||| |||| |||||||||| ||| || | Sbjct 718015 TCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGTTGG 717956 Query 111102 ACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGG 111161 | ||| ||||| ||||| || || | ||||||||||| || || | || |||| Sbjct 717955 ATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGG 717896 Query 111162 TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC------TCTT 111215 || | || || |||||||| |||| ||||| |||| | ||| |||| Sbjct 717895 CAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTT 717836 Query 111216 CA------TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269 || |||||| | ||| | ||| | || ||||| || || ||||| || || | Sbjct 717835 CAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTTCMT 717776 Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329 | ||| | ||| || | |||||| ||| |||||||| || || || ||||| | Sbjct 717775 TKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCAAGT 717716 Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389 |||||||||| ||||||||| || | ||||||||| | ||| | || || || || | Sbjct 717715 TCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAGTTT 717656 Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT---TG 111445 | || || | || | || || | ||| ||| | | | || | |||| | | Sbjct 717655 CAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTG----ATGGTCTTTCTW 717600 Query 111446 GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCG 111505 | | || ||| ||| || | || || ||| || || ||||| || || Sbjct 717599 CCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATCA 717540 Query 111506 GAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCG 111564 | |||||| | ||| || ||| |||| | | ||| | | || ||| || | Sbjct 717539 CTCAAACCTGGAG-CTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCT 717481 Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTT 111623 ||||||||| | ||||||||||| || | || || | ||||| | | || |||| Sbjct 717480 CTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGA-TTTCTT 717422 Query 111624 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 111683 | | ||| ||||| || | |||| ||| || | |||||| | ||||||||| || | Sbjct 717421 CTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCA 717362 Query 111684 GATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTG 111739 || | || | | || || | | ||| |||||| ||||| | || ||| Sbjct 717361 AGTACAAGGCAAAGGCACCTGGTCTCTTG-TTACCACCTTGATCAACATATCTGGCGGTG 717303 Query 111740 GCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATA 111799 ||| || || | | ||| ||||| | ||||| || ||| || || || ||| Sbjct 717302 TTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATG 717243 Query 111800 CGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAG 111859 ||| | ||| ||| | | |||||||||| |||||||| ||||| ||| ||| Sbjct 717242 TAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAG 717183 Query 111860 ATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCG 111919 ||||| ||||| ||| | | || | |||||||||| || ||||| ||||| | | Sbjct 717182 ATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGAT 717123 Query 111920 ATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTT 111979 | | ||| ||| |||||| || |||||||| ||||| |||||||| | ||||| | Sbjct 717122 ACCAAGAAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAG 717063 Query 111980 GCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039 ||||| |||| | ||| |||||| || ||| || || | ||| || |||| | Sbjct 717062 GCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTT 717003 Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATG 112099 || ||||| || || | || || | ||||| || || || || |||| | || | Sbjct 717002 TCACCGTGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTA 716943 Query 112100 CCATCGAGCCGTTGA--AGAT-AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 || | || | || | |||| || |||| || | ||| |||| ||||||||| Sbjct 716942 CCGTTGATC--TTCAATAGATAAGATCTT-TCCAAGGTCTTGAAACCAAAGTA 716893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031866543200