Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq11 280 2e-70 >seq11 Length=1501259 Score = 280 bits (310), Expect = 2e-70 Identities = 835/1282 (65%), Gaps = 21/1282 (2%) Strand=Plus/Minus Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 || ||||||||| ||||| ||||| || | | |||| | || |||||||| || || Sbjct 718170 GACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGGCATAGGTACCTTCAACCTCAGCTAA 718111 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||| | || || | || |||||||| || |||||||| || || |||| | Sbjct 718110 TTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAGTTTCAAAGATTTGAATGTTCAATTG 718051 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 |||||||| || || ||||| | | || ||| || || |||| || |||||||| Sbjct 718050 CTTGGCCTTTTCAGAGTCAAATGGAACTCTCAACATCATGAARGCATCAGCAAGACCTTG 717991 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATA 118600 ||||| | ||||||| | |||||||| || || | | ||| || || || || || Sbjct 717990 AACACCTAAAGCAATTGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTA 717931 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 | || || || ||||| ||| | || |||| | || || || |||||||| Sbjct 717930 GTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGGCAATGACTTTACAGACATCATGAAG 717871 Query 118661 CTTTTCGTAATCAAAACTGCGAGTC------TCTTCA------TTGACATACTTAGGAAG 118708 ||||| | ||||| || | | ||| |||||| |||||| | || | Sbjct 717870 CTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTTCAGAAACCTTGACAAAGGCTGGCAA 717811 Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 118768 ||| | || |||| ||||| |||| || || | | ||||| ||| || | |||||| Sbjct 717810 GGCAACAGARGCCAAGTTACARACAGCAGTTTCMTTKTCATCAGAGTATTCAACAATTTC 717751 Query 118769 CGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 118828 |||||||| || || ||||| |||||||||||||| || ||||| ||||||| Sbjct 717750 ACAACACAAGTTGGAGGAYTTGATGGTACCCAAGTTCTTTTGGTTGGACTTCTTGTTACA 717691 Query 118829 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 118888 | ||||||||||| ||| |||| || || || || ||||| | | | || || | Sbjct 717690 GGAATCCTTGTAAACAATGAATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGCGTA 717631 Query 118889 CCA-GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGT 118947 ||| || | | || | | || | ||| || || ||| || | | Sbjct 717630 CCACAACTTTTGGGCCTTG-ATGGTCTTTCTWCCTCTWCCTTCCAACTCATATTGATCAT 717572 Query 118948 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 119007 | || ||| || || ||||| || || | ||||| || | | || ||| Sbjct 717571 AAAGCTTTTCGAATTCATCACCATAAGCATCACTCAAACCTGGAGCTTCACTAGGAGAGA 717512 Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067 | | | ||| | | || ||| || | ||||||||| | ||||| ||||| || | Sbjct 717511 ACAAGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGRG 717452 Query 119068 CCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 119126 | | ||| | || | | | || |||||| | || || || | | || | Sbjct 717451 CTGGGAATAARTCTCTGGCTCTGA-TTTCTTCTTTACCGTGGTTCTTTCTGATGTCAATG 717393 Query 119127 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG 119185 || || | |||||| | |||||| ||||||| ||||| || | | ||| | | Sbjct 717392 AAATCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAGGCAAAGGCACCTGGTCTCTTG 717333 Query 119186 --ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243 |||| | || | ||||| || || ||| ||| || || | | ||| ||||| | | Sbjct 717332 TTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAA 717273 Query 119244 CCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATG 119303 |||| ||| || || || || ||| ||| | ||| ||||| | ||||||| Sbjct 717272 CCATTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATG 717213 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 |||| ||||||||| || || ||| |||||||| || || ||| | | || ||||| Sbjct 717212 TGCAAACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTAG 717153 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || || || ||||| |||| ||| | | ||| || ||||||||||| || Sbjct 717152 ATACCGTCAATGGAGTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCTT 717093 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTG 119483 || ||||| || ||||| | |||||| | |||||| |||| | ||| |||||| | Sbjct 717092 GGAGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAAG 717033 Query 119484 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543 | ||| || || | ||| | |||| ||| ||||||||||| | | || | ||| Sbjct 717032 TTGTAAGTTTCAATGACTTTGTCGATGTTTTCACCGTGAATACCAACAGCAACTCTCATG 716973 Query 119544 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCTC 119602 | || || ||| ||| |||| | | |||| | || | || || ||| |||| || Sbjct 716972 ATCAAGTGTTGCGGTCTTTCAACGATCTTACCGTTGATCTTCAATAGATAAGATCTT-TC 716914 Query 119603 CAAGGTCTTGAGACCAAAATAG 119624 ||||||||||| |||||| ||| Sbjct 716913 CAAGGTCTTGAAACCAAAGTAG 716892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435068582520