Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 4e-15
>seq2
Length=1277918
Score = 96.9 bits (106), Expect = 4e-15
Identities = 290/441 (66%), Gaps = 8/441 (2%)
Strand=Plus/Minus
Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857
|||||||| |||| | || || || |||||||||| |||||||||| || || ||
Sbjct 605723 TTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATT- 605665
Query 94858 TGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916
||| ||||| | ||| | |||||| |||| | ||||| ||| | ||||||||||||
Sbjct 605664 TGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTGACCTTCTCCAACGA 605605
Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATTA 94974
| | |||| | ||||| || | ||| || ||||| | | | || || |
Sbjct 605604 GTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTTTGTTGTTCTCYCA--C 605547
Query 94975 TTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATT 95034
||| | || ||| | ||| | || | || || ||||| ||||| ||
Sbjct 605546 TTGAAGAACAAGCCAGATCCAAAGATTGTTGARAGAATCATTTCAGAAGCTGTTGAAATY 605487
Query 95035 GAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAA 95094
|| || ||| | | | |||||| ||||| || | | ||||||||| ||||
Sbjct 605486 GAAAAGAGATACTTCATTGATGCCATTCCAGTTGCCTTGTTGGGTATGAATGCTGACTTG 605427
Query 95095 ATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA 95154
||| |||| |||| | || ||||||||||||| | | | ||| ||| |
Sbjct 605426 ATGAACCAATACGTTGAATTCGTTGCTGATAGATTGTT-AGTCGCCTTGGGTTGCGAAAA 605368
Query 95155 -ATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGAC 95213
|| | || | |||||||||||||||||||| ||||| | | | || |||||
Sbjct 605367 GATCTTCAATGTTACCAATCCATTTGACTTCATGGAAAACATATCCTTAGCTGGTAAGAC 605308
Query 95214 AAACTTCTTCGAAAAGAGGGT 95234
|||||||| |||||||| ||
Sbjct 605307 CAACTTCTTTGAAAAGAGAGT 605287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260676057080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |