Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 4e-15 >seq2 Length=1277918 Score = 96.9 bits (106), Expect = 4e-15 Identities = 290/441 (66%), Gaps = 8/441 (2%) Strand=Plus/Minus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 |||||||| |||| | || || || |||||||||| |||||||||| || || || Sbjct 605723 TTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATT- 605665 Query 94858 TGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 ||| ||||| | ||| | |||||| |||| | ||||| ||| | |||||||||||| Sbjct 605664 TGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTGACCTTCTCCAACGA 605605 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATTA 94974 | | |||| | ||||| || | ||| || ||||| | | | || || | Sbjct 605604 GTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTTTGTTGTTCTCYCA--C 605547 Query 94975 TTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATT 95034 ||| | || ||| | ||| | || | || || ||||| ||||| || Sbjct 605546 TTGAAGAACAAGCCAGATCCAAAGATTGTTGARAGAATCATTTCAGAAGCTGTTGAAATY 605487 Query 95035 GAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAA 95094 || || ||| | | | |||||| ||||| || | | ||||||||| |||| Sbjct 605486 GAAAAGAGATACTTCATTGATGCCATTCCAGTTGCCTTGTTGGGTATGAATGCTGACTTG 605427 Query 95095 ATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA 95154 ||| |||| |||| | || ||||||||||||| | | | ||| ||| | Sbjct 605426 ATGAACCAATACGTTGAATTCGTTGCTGATAGATTGTT-AGTCGCCTTGGGTTGCGAAAA 605368 Query 95155 -ATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGAC 95213 || | || | |||||||||||||||||||| ||||| | | | || ||||| Sbjct 605367 GATCTTCAATGTTACCAATCCATTTGACTTCATGGAAAACATATCCTTAGCTGGTAAGAC 605308 Query 95214 AAACTTCTTCGAAAAGAGGGT 95234 |||||||| |||||||| || Sbjct 605307 CAACTTCTTTGAAAAGAGAGT 605287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260676057080