Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 4e-11 >seq2 Length=1277918 Score = 82.4 bits (90), Expect = 4e-11 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 64877 ATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATA 64936 |||| |||||| | ||||| |||||||| | ||||| ||||| ||||| || | Sbjct 1211646 ATGTTAGTACTCCAACCTGTACCAATACCTTCACCACCATTGATTAAGATCATAGGGACC 1211587 Query 64937 ATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAATG 64996 | ||||||||| | ||||||| | |||| || | ||||||||||| | | Sbjct 1211586 ACTGGTGCATACCATTCTGGCTCAATGGTCTTTTCATCTTCTTGTAAATACTTCAATAAG 1211527 Query 64997 GCATCATCCT-CTTTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATA 65055 |||| || | ||| |||||| ||| || |||| ||| ||||| || || ||||| || Sbjct 1211526 GCATTGTCGTCCTTGTGGAAA-ATAAAAGAGGTTAGTTTGTTCAAATGTGTGTAAATGTA 1211468 Query 65056 TCTT 65059 |||| Sbjct 1211467 TCTT 1211464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679951170050