Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq11 104 3e-17 >seq11 Length=1501259 Score = 104 bits (114), Expect = 3e-17 Identities = 328/510 (64%), Gaps = 0/510 (0%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||| |||| || || || || || || || || || |||| || || ||| Sbjct 716972 TCATGAGAGTTGCTGTTGGTATTCACGGTGAAAACATCGACAAAGTCATTGAAACTTACA 717031 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 || ||||| || | | |||||| ||||| | || || | ||||| |||||||| Sbjct 717032 ACTTGATGTCTCAAAGATACTTCACCCACGCCTCTCCAACTTTGTTCAATGCCGGTACTC 717091 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | || || ||||| |||||| | || | |||||||| ||| |||||| || | Sbjct 717092 CAAGACCTCAAATGTCCTCTTGTTTCTTGGTATCAATGAAGGACGACTCCATTGACGGTA 717151 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 ||||||| || | ||||| || || || ||||||||| | || ||||| || | | Sbjct 717152 TCTACGACACCTTGAAGGAATGTGCTCAAATCTCCAAGACTGCTGGTGGTATTGGTTTGC 717211 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACG 19415 || | || ||| | || | |||| | || || || ||||| || | | Sbjct 717212 ACATCCACAACATCAGATCCACTGGTTCTTACATTGCAGGTACCAACGGTACTTCCAATG 717271 Query 19416 GTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCG 19475 || | | || ||| || | |||||||||||||| ||||| || || | || || || Sbjct 717272 GTTTGATTCCTATGGTCAGAGTCTTCAACAACACCGCCAGATATGTTGATCAAGGTGGTA 717331 Query 19476 GCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATT 19535 ||| | || | || ||| | ||| | || ||||||||| | || || | |||| Sbjct 717332 ACAAGAGACCAGGTGCCTTTGCCTTGTACTTGGAACCATGGCACTCAGATATCTTTGATT 717391 Query 19536 TCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGG 19595 || | || | | |||||| ||| | || || || | | || | ||| | | Sbjct 717392 TCATTGACATCAGAAAGAACCACGGTAAAGAAGAAATCAGAGCCAGAGAYTTATTCCCAG 717451 Query 19596 CCTTGTGGATTCCGGACCTATTCATGGAGA 19625 | | |||||||| || | |||||| ||| Sbjct 717452 CYCTTTGGATTCCAGATTTGTTCATGAAGA 717481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 79671 CTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTT 79730 ||||||||| || || || ||||| | || |||||||| || || || ||||||||||| Sbjct 717189 CTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTT 717130 Query 79731 CATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGT 79790 ||| | |||| ||| || ||||| || || | |||||||| ||||| | || Sbjct 717129 CATTGATACCAAGAAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGT 717070 Query 79791 CGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGG 79850 || | ||||| |||||| | |||| ||||| | ||| || || |||| Sbjct 717069 TGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTC 717010 Query 79851 GAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || || || ||||| || || || || || | ||||| Sbjct 717009 GATGTTTTCACCGTGAATACCAACAGCAACTCTCATGA 716972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524683438480