Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq14 129 7e-25
seq16 127 2e-24
seq1 89.7 6e-13
seq11 82.4 9e-11
>seq14
Length=450723
Score = 129 bits (142), Expect = 7e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || || || || || || ||||| |||||| | ||||| || ||
Sbjct 422317 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 422258
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||| | | | | ||||||||||| || ||||| || || || || || || ||
Sbjct 422257 TGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAGCA 422198
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | |||| || |||||||||||| | || || | | | || || | ||||| ||
Sbjct 422197 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTACAA 422138
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||||||||| || ||| ||||||||
Sbjct 422137 CATCCAAAAGGAATCCACCCTGCATTTAGTCTTG 422104
>seq16
Length=958289
Score = 127 bits (140), Expect = 2e-24
Identities = 165/227 (73%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 27393 AAATATTAC-TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTG 27451
|||||| | |||||||||||| ||||| || || | ||||| ||||| || || | |
Sbjct 204154 AAATATCAAATATAATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAG 204213
Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511
| ||||| || |||| ||||| | | ||| ||||||| || || ||||| || |
Sbjct 204214 AAGTTGAATCTAGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTA 204273
Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571
|||| || || || || | | || ||||||||||||||| | || || | | | |||
Sbjct 204274 TTCCACCTGATCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCT 204333
Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | ||||| || ||||||||||||| || || ||| |||| |||
Sbjct 204334 TATCTGACTACAACATCCAAAAGGAATCAACACTCCATTTAGTTTTG 204380
>seq1
Length=232064
Score = 89.7 bits (98), Expect = 6e-13
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | ||||| ||||| |||||| | || || || || || | |||
Sbjct 90567 TTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCATC 90626
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| | | ||||| || || || |||||||| || ||||| || || || || | ||
Sbjct 90627 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90686
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || ||||||||||| | || |||| | || | | || || || ||||||||
Sbjct 90687 ATCTTCTCTGGTAAGCAATTAGAAGATGGCAGAACTTTGTCTGAYTACAACATCCAAAAG 90746
Query 27595 GAATCCACTCTTCATCTAGTC 27615
||||| || | ||| |||||
Sbjct 90747 GAATCAACATTGCATTTAGTC 90767
>seq11
Length=1501259
Score = 82.4 bits (90), Expect = 9e-11
Identities = 241/366 (66%), Gaps = 4/366 (1%)
Strand=Plus/Minus
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
||||| || | || || | ||| || ||| || || | | |||||| || | ||||
Sbjct 717329 CCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAACCA 717270
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497
| || |||||| ||||| | || || || ||| | | ||| ||| ||
Sbjct 717269 TTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATGTGC 717210
Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557
|| ||| || ||||| | ||| || || |||||||| |||| ||| || || ||
Sbjct 717209 AA-ACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTAGAT 717151
Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617
|| || ||| || | ||||| | ||||||||| ||||| ||||| |||
Sbjct 717150 ACCGTCAATGGAGTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCTTGG 717091
Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677
| ||||||||||||| ||||| | ||||| |||| || | | ||||||| ||
Sbjct 717090 AGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAAGTT 717031
Query 81678 ATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736
|| ||||| |||| || | || | |||||||||||||| | ||| || | ||| |
Sbjct 717030 GTAAGTTTCAATGACTTTGTCG-ATGTTTTCACCGTGAATACCAACAGCAACTCTCATGA 716972
Query 81737 ACATGT 81742
|| ||
Sbjct 716971 TCAAGT 716966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310278809040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |