Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq17 116 3e-21 >seq17 Length=1055512 Score = 116 bits (128), Expect = 3e-21 Identities = 282/426 (66%), Gaps = 17/426 (4%) Strand=Plus/Plus Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 ||||| ||||| ||||||| |||||||||||||| |||||||||||||| || |||||| Sbjct 816668 GAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAATGGAGACACTTTGGTGCTGAGTAT 816727 Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGT-ACGTGATCGA 34506 || || | | ||||| | || ||||| ||||| ||| ||| | | ||| | Sbjct 816728 GTGGACTGCCACACAGACTACACCGGCAAGGGATACGACCAACTG-AGTGAGATCATCCA 816786 Query 34507 CACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGA 34566 || | ||| ||||| | |||||||| ||| | |||| ||||||||||| || Sbjct 816787 CAAGCTAAAGACCAACCCATACGACAGAAGAATCATCATGTCTGCGTGGAACCCTCCAGA 816846 Query 34567 TCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT--------- 34617 || ||||| || ||||| |||||| | | ||||| |||||||| Sbjct 816847 CTTCAAGAAAATGGCCCTTCCCCCATGCCACGTCTTTTGCCAGTTCTACGTGTCATTCCC 816906 Query 34618 CGCGAATGGGGAGC------TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTT 34671 | || ||| | || || || || ||| |||| | |||||||| || Sbjct 816907 TGAAAACCAAAAGCCTCAATTATCATGTATTCTTTACCAAAGATCATGCGACATGGGATT 816966 Query 34672 AGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGT 34731 || || || |||||||||||| || || |||| || | ||||| ||| | || || Sbjct 816967 GGGTGTTCCATTCAACATTGCTTCATATGCCTTGCTGACCAAAATGATTGCTAAGGTTGT 817026 Query 34732 GGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCA 34791 | ||| ||| || | | || || |||| ||||| ||| ||||| | |||| Sbjct 817027 TGACATGGACTGTGGTGACTTCATCCACACTATGGGTGATGCTCATGTCTACAAGGACCA 817086 Query 34792 CATCGA 34797 ||| || Sbjct 817087 CATTGA 817092 Score = 116 bits (128), Expect = 3e-21 Identities = 282/426 (66%), Gaps = 17/426 (4%) Strand=Plus/Minus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 || ||||||| | ||||| ||| ||||| |||| || || | | || ||| || Sbjct 817092 TCAATGTGGTCCTTGTAGACATGAGCATCACCCATAGTGTGGATGAAGTCACCACAGTCC 817033 Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667 | | || || | ||| ||||| | || |||| || || |||||||||||| || Sbjct 817032 ATGTCAACAACCTTAGCAATCATTTTGGTCAGCAAGGCATATGAAGCAATGTTGAATGGA 816973 Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACA------GCTCCCCA 6721 || || || |||||||| | |||| ||| || || || || | ||| Sbjct 816972 ACACCCAATCCCATGTCGCATGATCTTTGGTAAAGAATACATGATAATTGAGGCTTTTGG 816913 Query 6722 TTCGCG---------ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGA 6772 || | |||||||| ||||| | | |||||| ||||| || ||||| Sbjct 816912 TTTTCAGGGAATGACACGTAGAACTGGCAAAAGACGTGGCATGGGGGAAGGGCCATTTTC 816853 Query 6773 GGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTC 6832 || || ||||||||||| |||| | ||| |||||||| | ||||| ||| Sbjct 816852 TTGAAGTCTGGAGGGTTCCACGCAGACATGATGATTCTTCTGTCGTATGGGTTGGTCTTT 816793 Query 6833 AAGGTGTCGATCACGT-ACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCT 6891 | ||| ||| | | ||| ||| ||||| ||||| || | ||||| | | || Sbjct 816792 AGCTTGTGGATGATCTCACT-CAGTTGGTCGTATCCCTTGCCGGTGTAGTCTGTGTGGCA 816734 Query 6892 CCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 || |||||| || |||||||||||||| |||||||||||||| ||||||| ||||| Sbjct 816733 GTCCACATACTCAGCACCAAAGTGTCTCCATTGGAACCCGTAGACTGGGCCCAGATCGCC 816674 Query 6952 CTCCTC 6957 ||||| Sbjct 816673 TTCCTC 816668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262304744240