Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq17 116 3e-21
>seq17
Length=1055512
Score = 116 bits (128), Expect = 3e-21
Identities = 282/426 (66%), Gaps = 17/426 (4%)
Strand=Plus/Plus
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
||||| ||||| ||||||| |||||||||||||| |||||||||||||| || ||||||
Sbjct 816668 GAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAATGGAGACACTTTGGTGCTGAGTAT 816727
Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGT-ACGTGATCGA 34506
|| || | | ||||| | || ||||| ||||| ||| ||| | | ||| |
Sbjct 816728 GTGGACTGCCACACAGACTACACCGGCAAGGGATACGACCAACTG-AGTGAGATCATCCA 816786
Query 34507 CACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGA 34566
|| | ||| ||||| | |||||||| ||| | |||| ||||||||||| ||
Sbjct 816787 CAAGCTAAAGACCAACCCATACGACAGAAGAATCATCATGTCTGCGTGGAACCCTCCAGA 816846
Query 34567 TCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT--------- 34617
|| ||||| || ||||| |||||| | | ||||| ||||||||
Sbjct 816847 CTTCAAGAAAATGGCCCTTCCCCCATGCCACGTCTTTTGCCAGTTCTACGTGTCATTCCC 816906
Query 34618 CGCGAATGGGGAGC------TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTT 34671
| || ||| | || || || || ||| |||| | |||||||| ||
Sbjct 816907 TGAAAACCAAAAGCCTCAATTATCATGTATTCTTTACCAAAGATCATGCGACATGGGATT 816966
Query 34672 AGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGT 34731
|| || || |||||||||||| || || |||| || | ||||| ||| | || ||
Sbjct 816967 GGGTGTTCCATTCAACATTGCTTCATATGCCTTGCTGACCAAAATGATTGCTAAGGTTGT 817026
Query 34732 GGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCA 34791
| ||| ||| || | | || || |||| ||||| ||| ||||| | ||||
Sbjct 817027 TGACATGGACTGTGGTGACTTCATCCACACTATGGGTGATGCTCATGTCTACAAGGACCA 817086
Query 34792 CATCGA 34797
||| ||
Sbjct 817087 CATTGA 817092
Score = 116 bits (128), Expect = 3e-21
Identities = 282/426 (66%), Gaps = 17/426 (4%)
Strand=Plus/Minus
Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607
|| ||||||| | ||||| ||| ||||| |||| || || | | || ||| ||
Sbjct 817092 TCAATGTGGTCCTTGTAGACATGAGCATCACCCATAGTGTGGATGAAGTCACCACAGTCC 817033
Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667
| | || || | ||| ||||| | || |||| || || |||||||||||| ||
Sbjct 817032 ATGTCAACAACCTTAGCAATCATTTTGGTCAGCAAGGCATATGAAGCAATGTTGAATGGA 816973
Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACA------GCTCCCCA 6721
|| || || |||||||| | |||| ||| || || || || | |||
Sbjct 816972 ACACCCAATCCCATGTCGCATGATCTTTGGTAAAGAATACATGATAATTGAGGCTTTTGG 816913
Query 6722 TTCGCG---------ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGA 6772
|| | |||||||| ||||| | | |||||| ||||| || |||||
Sbjct 816912 TTTTCAGGGAATGACACGTAGAACTGGCAAAAGACGTGGCATGGGGGAAGGGCCATTTTC 816853
Query 6773 GGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTC 6832
|| || ||||||||||| |||| | ||| |||||||| | ||||| |||
Sbjct 816852 TTGAAGTCTGGAGGGTTCCACGCAGACATGATGATTCTTCTGTCGTATGGGTTGGTCTTT 816793
Query 6833 AAGGTGTCGATCACGT-ACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCT 6891
| ||| ||| | | ||| ||| ||||| ||||| || | ||||| | | ||
Sbjct 816792 AGCTTGTGGATGATCTCACT-CAGTTGGTCGTATCCCTTGCCGGTGTAGTCTGTGTGGCA 816734
Query 6892 CCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951
|| |||||| || |||||||||||||| |||||||||||||| ||||||| |||||
Sbjct 816733 GTCCACATACTCAGCACCAAAGTGTCTCCATTGGAACCCGTAGACTGGGCCCAGATCGCC 816674
Query 6952 CTCCTC 6957
|||||
Sbjct 816673 TTCCTC 816668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262304744240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |