Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq14 116 9e-21 seq1 105 2e-17 seq16 96.9 8e-15 >seq14 Length=450723 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | || || ||||| || ||||||||||| || || | | || || || Sbjct 422101 TCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 422160 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | ||||| || |||||||| | | |||||| ||||| || | ||||| || Sbjct 422161 GTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTT 422220 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || | ||||||| ||||| ||| ||||| | ||| || Sbjct 422221 GTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACCTCCAAAGTAAT 422280 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || ||||| ||||| || | |||||||| Sbjct 422281 GGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319 >seq1 Length=232064 Score = 105 bits (116), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||||||| | || | || || || ||||||||||| || || | | || || || Sbjct 90773 TCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCC 90714 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || | |||||| | | |||||| ||||| |||| |||||||| Sbjct 90713 ATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 90654 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || |||||||| || | ||| || || | ||| || Sbjct 90653 GTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAAT 90594 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | ||||| ||||| Sbjct 90593 GGTCTTACCGGTTAAGGTCTTGACAAA 90567 >seq16 Length=958289 Score = 96.9 bits (106), Expect = 8e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || || || ||||||||||| || || | | ||| || || ||||||| ||| Sbjct 204370 TGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGC 204311 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | | |||||| ||||| |||| |||||||| || ||||| || Sbjct 204310 TTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTA 204251 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || || |||| |||| |||||| || | ||||| ||||| || || Sbjct 204250 GACTTAACAGCATCAATGGAGTCACTAGATTCAACTTCTAAGGTGATGGTCTTACCGGTT 204191 Query 211092 AGAGTCTTTACAAACACCTGCATTTTAT 211119 | || || ||||| | |||||| ||| Sbjct 204190 AATGTTTTAACAAAAATTTGCATTATAT 204163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151747522205