Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq14 161 2e-34
seq1 158 3e-33
seq16 147 5e-30
seq11 93.3 1e-13
>seq14
Length=450723
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || || |||||||| ||||||| ||||| || | |||||||| ||
Sbjct 422101 TCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 422160
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| ||||| ||||||||||| | || |||||| || || || |||||||| ||
Sbjct 422161 GTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTT 422220
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||| || ||| ||| ||||||| || || | ||| || || || || ||
Sbjct 422221 GTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACCTCCAAAGTAAT 422280
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || | |||||||| ||| | |||||||||
Sbjct 422281 GGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319
>seq1
Length=232064
Score = 158 bits (174), Expect = 3e-33
Identities = 155/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| ||||| | || | || ||||| ||||||| ||||| || | ||||||||| ||
Sbjct 90773 TCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCC 90714
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| ||||| |||| |||||| | || |||||| || || ||||||||||||||
Sbjct 90713 ATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 90654
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||||| |||||||| || | | ||| || || || || ||
Sbjct 90653 GTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAAT 90594
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || || || || ||
Sbjct 90593 GGTCTTACCGGTTAAGGTCTT 90573
>seq16
Length=958289
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||||| || ||||| ||||||| ||||| || | || ||||| ||
Sbjct 204383 TCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACC 204324
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || |||||| || || ||||||||||||||
Sbjct 204323 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTT 204264
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||| || ||| ||||| || |||| ||| | ||| || ||||| |||||
Sbjct 204263 ATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACTTCTAAGGTGAT 204204
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTAT 225718
||||| || || || ||||| | || | ||||||| |||
Sbjct 204203 GGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATAT 204163
>seq11
Length=1501259
Score = 93.3 bits (102), Expect = 1e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| |||||||||||||| || || || ||||| || || |||||||| |||||||||||
Sbjct 1311940 GAAGATTTGACCATCAGTGATGGAAATGACATTGGTTGGAATATAAGCGGAAACATCACC 1311881
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580
|||| ||||| | || ||||| || || | || |||||||| || ||
Sbjct 1311880 ACCTTGGGTTTCAATGACTGGTAAAGCAGTCATRGAACCACCACCTAACTT 1311830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530940251798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |