Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2 233 2e-56
>seq2
Length=1277918
Score = 233 bits (258), Expect = 2e-56
Identities = 600/907 (66%), Gaps = 13/907 (1%)
Strand=Plus/Plus
Query 4236 GACTTTGAACAAACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTT 4295
||||| | | |||||| |||||||| || ||||||| |||||| ||||| || ||
Sbjct 605251 GACTTGGCAATAACACCTGCCTTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTC 605310
Query 4296 TTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTT 4355
|| || |||| || || |||||||| || ||||| ||||| || | ||| | |||
Sbjct 605311 TTACCAGCTAAGGATATGTTTTCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTT 605370
Query 4356 TCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT 4415
|| || | || || | ||||| ||||| || ||||| | || ||| |||| |
Sbjct 605371 TCGCAACCCAAGGCGACTAACAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAG 605430
Query 4416 TC-GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTA 4473
|| ||| || || || | || || || | || | | || | ||||| ||| |
Sbjct 605431 TCAGCA-TTCATACCCAACAAGGCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRA 605488
Query 4474 TAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAA 4531
| || ||||||| || || ||| | | |||||| ||| || || || ||
Sbjct 605489 TTTCAACAGCTTCTGAAATGAT-TCTYTCAACA-ATCTTTGGATCTGGCTTGTTCTTCAA 605546
Query 4532 GTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTC 4591
|| ||||| ||||| ||||| ||| || |||||||||||||||| |||| ||
Sbjct 605547 GTGRGAGAACAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTC 605606
Query 4592 GTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAA 4651
||| || || || || || ||||| |||||| |||| || | ||| || ||||| |||||
Sbjct 605607 GTTGGAGAAGGTCAAACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAA 605666
Query 4652 TGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA 4711
||| || || ||||| | || || || || || || || || | || | |||
Sbjct 605667 TGATCCGGAGAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAG 605726
Query 4712 GCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAAT 4771
| | | ||||||| |||||| | | ||||| | || |||| ||| | |||||
Sbjct 605727 GGCGTCCTTGTCTTGGATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAAT 605786
Query 4772 TGTGTATATAGCGTTAAATAA-TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTA 4830
|| | ||| || || ||||| | | |||| | | | ||| | || || ||||| |
Sbjct 605787 GGTTTCTATGGCATTGAATAAGAATTCGTTTTCCTTA-GKGTCCTTGATGTATGTGTCCA 605845
Query 4831 TTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGC 4890
| || | || |||| || || || ||||| || || || || || || || |
Sbjct 605846 ACAATAAGGAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAAC 605905
Query 4891 ATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTA 4950
| | ||||||| | ||| || || | | || |||| || ||||| || || || |
Sbjct 605906 ACTTGGCTTCTGGAATTTGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAA 605965
Query 4951 TACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAG 5007
|||| ||| ||| ||||| || ||||| || || |||||| | |||| |||
Sbjct 605966 TACCATCAGAGGCAGCAAAGAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCAT 606025
Query 5008 GCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAA 5067
| | || ||||||| | ||||| || | ||||||| ||||||| | ||||| |
Sbjct 606026 TCATTCTGTTGTTCCAGTCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGA 606085
Query 5068 ACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGA 5127
| || ||||| ||| | || || |||||| ||||| ||| || || | | ||
Sbjct 606086 AAGAAGCTTCGGCTCTCTTATARGCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGA 606145
Query 5128 CAAATCT 5134
|||||||
Sbjct 606146 CAAATCT 606152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049511520661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |