Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq11 425 8e-114 seq2 179 5e-40 >seq11 Length=1501259 Score = 425 bits (470), Expect = 8e-114 Identities = 1474/2285 (65%), Gaps = 48/2285 (2%) Strand=Plus/Minus Query 76778 CAATG-TAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 ||||| | || ||||| | || ||| || | || ||| | | ||| ||||||||||| | Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | ||| |||||| |||||||| |||||| |||| || | ||| | Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || || || ||||| || ||| |||||| ||||| ||| ||||||||| ||||| | Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 || ||||||||||||| | |||||||| ||| ||| | | | || || || | || Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTCCTTCATTTCTTGTG 718493 Query 77017 GAAGGTTTG-TA--TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 | | ||||| || | ||| |||||||| | | || || | ||| || | | Sbjct 718492 GGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCTT 718433 Query 77074 CATTCCACAATTTCC-TCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 ||| ||| ||| || | || |||| | | | | | |||||||| ||||| || Sbjct 718432 CATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTAT 718374 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 || |||||||| ||| | | ||| || || || ||||||| | | |||||||| Sbjct 718373 TCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTG 718314 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 | || | |||||| | ||| |||||||||||||| || || || || || ||||| Sbjct 718313 TAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTT 718254 Query 77253 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA 77312 | |||||| | || || | |||| | | ||| ||||| | | || || || Sbjct 718253 AAACCATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGAGCA 718194 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCA 77372 || | ||| |||||||| | | || | ||| |||||| | || | || Sbjct 718193 ACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGGCA 718134 Query 77373 TAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTT 77432 || | ||||| ||||||| ||| | ||||| || || ||| ||| || ||| Sbjct 718133 TAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAGTT 718074 Query 77433 TCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAA-A 77490 || || || | | || | | |||| ||| | ||||| ||| | | | || | Sbjct 718073 TCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTC-AGAGTCAAATGGA-ACTCTCAACA 718016 Query 77491 GAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 77550 || || ||||| || | || ||||| || | | |||| ||||| |||||| | |||| Sbjct 718015 TCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGTTGG 717956 Query 77551 AAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAA 77610 | || |||| | || ||| || || || |||| |||| ||| | || | Sbjct 717955 ATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGG 717896 Query 77611 CAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA----------------TCTT 77654 ||| |||||| || || | || || | |||||| | |||| Sbjct 717895 CAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTT 717836 Query 77655 CC--ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 | | | | ||||| ||| || | ||| || | ||||| || || || | Sbjct 717835 CAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTTCMT 717776 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 | | | | |||| | || || ||| | || | ||||| || |||| | Sbjct 717775 TKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCAAGT 717716 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 | | ||||||| ||| || || || || ||||| |||| ||| || ||||| || |||| Sbjct 717715 TCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAGTTT 717656 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTTTATCATAGATTTGTA 77890 || | || | ||| | || | | ||| | ||| | | | || || | ||| | Sbjct 717655 CAGTTTGRGCTTCTAAGATGGCGTACCACA--ACTTTTGGGCCTTGATGGTC--TTTCTW 717600 Query 77891 TCGCCTCTCTCTT-----TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA 77945 ||||| ||| ||||||||| ||| ||| ||| |||||||| || || || Sbjct 717599 ---CCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCA 717543 Query 77946 TCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACT 78005 ||| ||| || || |||| | || | | ||| | ||| ||| ||| |||| ||| Sbjct 717542 TCACTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACT 717483 Query 78006 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCT 78065 | ||||| || | ||| || ||||| || || |||| |||| || ||| |||| Sbjct 717482 CTCTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCT 717423 Query 78066 TCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 78125 || || || |||||| | | || | || || | ||||| || ||||||||||| Sbjct 717422 TCTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCC 717363 Query 78126 AGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTG 78185 | || | || | | || |||| || ||||| || ||||| | ||||||||||||| Sbjct 717362 AAGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTG 717303 Query 78186 TTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATA 78245 || || | ||||| | ||| ||||| | ||| || || || || || || || | ||| Sbjct 717302 TTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATG 717243 Query 78246 TAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGAT 78305 ||| ||| | | | || || ||| | || || || || || |||| || Sbjct 717242 TAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAG 717183 Query 78306 ATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGTT 78364 ||| |||| || ||||| || ||||||||||| || || ||| ||| ||| || | Sbjct 717182 ATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGAT 717123 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 | ||| ||||| ||||||||| | ||| || ||||| || || || ||||| Sbjct 717122 ACCAAG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGA 717064 Query 78425 TGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATG-T 78483 || || || || || ||| ||| | | ||||| |||||||| || || ||| | Sbjct 717063 GGCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTT 717004 Query 78484 CCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 || | ||||| || || || || | ||| | || || || ||||||||||| ||| Sbjct 717003 TTCACCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCT 716945 Query 78544 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 78603 || || || ||||| | || ||| ||||||| || || |||||||| |||||||| Sbjct 716944 TACCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGT 716885 Query 78604 AAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATAT 78663 |||||||| ||| | || || ||| || || | || || | ||| | ||| | | Sbjct 716884 TGAAGTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGACAGTTT 716825 Query 78664 CCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAA 78723 | || | ||||| || || || ||||| ||| | ||||| ||||| Sbjct 716824 CGTAAACGTCATCAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGTTGT 716765 Query 78724 ATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAG 78783 |||| ||||| || || | | ||| ||||||| |||| |||||| || ||| | | Sbjct 716764 ATAAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGATGG 716705 Query 78784 CTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATT 78842 | ||||| ||||| |||| ||| ||||||||||| || || || || ||| | Sbjct 716704 CAATTCTGGCAGCAAGAACAGCGTAATCAGGATGGACAGTGGT-CATGTAGGCACAAGTC 716646 Query 78843 TCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACT 78902 || || ||||| | ||||| || || || | || || | || | || ||| | | Sbjct 716645 TCAGCAGCTAAGTTGTCTAATTCGATGGTAGAAACACCTTCGTAGACACCGGTAATGATT 716586 Query 78903 TTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTA 78962 | || ||| |||||||| || | | || || || || || ||||||| | | | Sbjct 716585 CTTTGGGTGATCTTGACAGGGTCGATATGCTTAGAGTCTAAACCGTAACATAGTCTGGCA 716526 Query 78963 ATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCATTTCGTTTAATAACG 79022 || | || ||||||||||||||| |||| | || | || | || ||||| ||| Sbjct 716525 ATTCTGGAAGTGATTTTATCAAATTGAACAGGGACTTTTCTCCCGTCTCTTTTAACAACA 716466 Query 79023 AACAT 79027 ||||| Sbjct 716465 AACAT 716461 >seq2 Length=1277918 Score = 179 bits (198), Expect = 5e-40 Identities = 571/883 (65%), Gaps = 10/883 (1%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| || | || || || || || || || || | || ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| || ||||||||||| |||| | || |||| | || || | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 | |||||| ||||||||||| | ||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 48030 TTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 |||||| | || || | ||| | ||||| ||| || ||||| || || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAA 48148 || | | | ||| | | ||| || |||| ||||| ||||| Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTTCTTCAAGTGRGAGAACAACAAACAGGCAAA 605570 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 ||| || | |||||| ||||| | || || ||||| || || || | ||| ||||| Sbjct 605571 GTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCAT 605630 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 | || || || | ||| || || || || || ||||| || ||||| | || || Sbjct 605631 CAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCTC 605690 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACC- 48324 || || || || || ||||| || | | ||| || |||| | ||||| | Sbjct 605691 AACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATCT 605750 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 | || ||||| || ||||| | ||| | ||| || |||||||| ||||| || | | Sbjct 605751 GATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAGA 605809 Query 48385 AGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGT 48444 | | ||||| || || || | ||| || || | || | || |||| |||| Sbjct 605810 ATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAGT 605869 Query 48445 GAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCT 48504 | || ||||| || || || || || || ||||| | ||||||| || || || | Sbjct 605870 GGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACYT 605929 Query 48505 CCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATG 48564 | | | | || |||| |||| ||||| || || || |||||| |||||||| || | Sbjct 605930 CAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAGG 605989 Query 48565 CTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAGTCATTGA 48621 | || || |||||| || ||||||| | ||| | || |||||||||| | Sbjct 605990 CCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATGTA 606049 Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681 ||| || || | ||| | ||||||||||||||| || || || || ||| | ||||| Sbjct 606050 AATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATARG 606109 Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 | ||| || ||| | | | ||||||||| | |||||||| Sbjct 606110 CTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668652382880