Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq14 102 2e-16 seq1 87.8 4e-12 >seq14 Length=450723 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| || || || || |||||||||||||| || | ||||||||| || Sbjct 422101 TCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 422160 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||||| || || |||||||| | || || || || | | ||| ||||| || Sbjct 422161 GTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTT 422220 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| || ||| | || | | || ||| || || || | |||||| Sbjct 422221 GTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACCTCCAAAGTAAT 422280 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || ||||| | |||||||| Sbjct 422281 GGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319 >seq1 Length=232064 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | ||| | || || || |||||||||||||| || | |||||||| || Sbjct 90773 TCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCC 90714 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| || || | |||||| | || || || || | | || |||||||| Sbjct 90713 ATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 90654 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || ||||||| || | | | || | | || ||||| | |||||| Sbjct 90653 GTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAAT 90594 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAA 152095 || || || || | ||||| || || Sbjct 90593 GGTCTTACCGGTTAAGGTCTTGACAAA 90567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820548683407