Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 2e-27
seq14 131 4e-25
seq16 127 4e-24
>seq1
Length=232064
Score = 138 bits (152), Expect = 2e-27
Identities = 140/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| |||||||||||||| |||| | || | |||||| |||| ||| || || | ||
Sbjct 90749 TTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAA 90690
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| || | |||||| ||| |||||||| ||||||||||||||||| || || || |
Sbjct 90689 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGC 90630
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| || || | || ||||||||| | ||| || |||||||| || || ||||| ||
Sbjct 90629 GTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGAC 90570
Query 283088 GAA 283090
||
Sbjct 90569 AAA 90567
>seq14
Length=450723
Score = 131 bits (144), Expect = 4e-25
Identities = 146/195 (75%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | || || |||| ||| || || || ||
Sbjct 422125 TTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAA 422184
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| || | |||||| ||| || ||||| || ||||||||||| || || || || |
Sbjct 422185 GATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTAACAAT 422244
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| | || |||| |||||| || | ||| || |||||||| || | ||| || ||
Sbjct 422245 GTCGATGGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTAC 422304
Query 283088 GAATATCTGCATTTT 283102
||| || ||||||||
Sbjct 422305 GAAAATTTGCATTTT 422319
>seq16
Length=958289
Score = 127 bits (140), Expect = 4e-24
Identities = 144/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | || || || | ||| || || |||||
Sbjct 204359 TTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 204300
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||| ||| |||||||| ||||| |||||||| || | || || |
Sbjct 204299 GATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTAGACTTAACAGC 204240
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||| || | ||| || ||| ||||| | ||||| |||||||| || || || |||||
Sbjct 204239 ATCAATGGAGTCACTAGATTCAACTTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAAC 204180
Query 283088 GAATATCTGCATT 283100
|| || ||||||
Sbjct 204179 AAAAATTTGCATT 204167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738972007118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |