Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 138 2e-27 seq14 131 4e-25 seq16 127 4e-24 >seq1 Length=232064 Score = 138 bits (152), Expect = 2e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||||||||| |||| | || | |||||| |||| ||| || || | || Sbjct 90749 TTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAA 90690 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| || | |||||| ||| |||||||| ||||||||||||||||| || || || | Sbjct 90689 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGC 90630 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || | || ||||||||| | ||| || |||||||| || || ||||| || Sbjct 90629 GTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGAC 90570 Query 283088 GAA 283090 || Sbjct 90569 AAA 90567 >seq14 Length=450723 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || |||| ||| || || || || Sbjct 422125 TTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAA 422184 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| || | |||||| ||| || ||||| || ||||||||||| || || || || | Sbjct 422185 GATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTAACAAT 422244 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| | || |||| |||||| || | ||| || |||||||| || | ||| || || Sbjct 422245 GTCGATGGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTAC 422304 Query 283088 GAATATCTGCATTTT 283102 ||| || |||||||| Sbjct 422305 GAAAATTTGCATTTT 422319 >seq16 Length=958289 Score = 127 bits (140), Expect = 4e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || || | ||| || || ||||| Sbjct 204359 TTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 204300 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||| ||| |||||||| ||||| |||||||| || | || || | Sbjct 204299 GATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTAGACTTAACAGC 204240 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || | ||| || ||| ||||| | ||||| |||||||| || || || ||||| Sbjct 204239 ATCAATGGAGTCACTAGATTCAACTTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAAC 204180 Query 283088 GAATATCTGCATT 283100 || || |||||| Sbjct 204179 AAAAATTTGCATT 204167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738972007118