Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 6e-38
>seq2
Length=1277918
Score = 172 bits (190), Expect = 6e-38
Identities = 540/834 (65%), Gaps = 11/834 (1%)
Strand=Plus/Plus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
|||| || || || |||||||| |||| ||||| |||||||| || ||||||||||| |
Sbjct 605294 TTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTTTCCATGAAGTCAAATGGATTGG 605353
Query 23300 AAGTATTATATACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAA 23359
| ||| | | || || || | ||| | ||||| || || |||||||
Sbjct 605354 TAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAACAATCTATCAGCAACGAATTCAA 605413
Query 23360 TATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATA 23419
||||| |||||| ||| || ||||| | | |||||||| |||||| |
Sbjct 605414 CGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAGGCAACTGGAATGGCATCAATGA 605473
Query 23420 AGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTTCAC 23476
|| || ||||| || |||||| ||| ||| ||| | |||||| ||| |
Sbjct 605474 AGTATCTCTTTTCRATTTCAACAGCTTCTGAAATGATTCTYTCAACAAT--CTTTGGATC 605531
Query 23477 TAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCAT 23536
| | | | | || || | ||||| ||||| ||||| ||| |||| ||||| |
Sbjct 605532 TGGCTTGTTCTTC-AAGTGRGAGAACAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGT 605590
Query 23537 CCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCC 23596
| || | ||||| || || || || || || || ||||| || ||| || || | ||
Sbjct 605591 CTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCATCAAACCTTTCTTCTTYAACC 605650
Query 23597 AAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAA 23656
| || || ||||||||||||||||| ||||| | |||||||||||| || || || || |
Sbjct 605651 AGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCTCAACAGCAGCGAAAGCAACCA 605710
Query 23657 GACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCA 23716
| | | | |||| || | | || |||||| | | | ||| | |||||
Sbjct 605711 GTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATCTGATGGCCCATTCGGCCTTTT 605770
Query 23717 ATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTG 23776
|| | ||| ||||| || || || || | || ||||| | | ||
Sbjct 605771 CCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAGAATTCGTTTTCCTTAGKGTCCT 605830
Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836
| || ||||| || | | ||| || |||| || || || ||||| || || |
Sbjct 605831 TGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTT 605890
Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896
| || || || ||||| | ||||| | | ||| || ||| | | || ||| | | |
Sbjct 605891 GGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACYTCAGCAGAGAAATTTTCAACCA 605950
Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956
| || || || |||||||||||| ||||||||||| || | || |||||
Sbjct 605951 AGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAGGCCAAMACTCTRGAAATAAAGA 606010
Query 23957 GTCTTTC---ATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACT 24012
|||||| ||| || || | || ||||| |||| | ||| || || ||||||| |
Sbjct 606011 ATCTTTCGTTTTCA-TTCATTCTGTTGTTCCAGTCATGTAAATCCTTGGACAAATCAATT 606069
Query 24013 TCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCA 24066
|| ||| ||||||| ||| || ||| | |||||| | |||||| |||
Sbjct 606070 TCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATARGCTTCCCAAATTTCA 606123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487889183800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |