Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2 172 6e-38 >seq2 Length=1277918 Score = 172 bits (190), Expect = 6e-38 Identities = 540/834 (65%), Gaps = 11/834 (1%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||| || || || |||||||| |||| ||||| |||||||| || ||||||||||| | Sbjct 605294 TTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTTTCCATGAAGTCAAATGGATTGG 605353 Query 23300 AAGTATTATATACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAA 23359 | ||| | | || || || | ||| | ||||| || || ||||||| Sbjct 605354 TAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAACAATCTATCAGCAACGAATTCAA 605413 Query 23360 TATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATA 23419 ||||| |||||| ||| || ||||| | | |||||||| |||||| | Sbjct 605414 CGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAGGCAACTGGAATGGCATCAATGA 605473 Query 23420 AGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTTCAC 23476 || || ||||| || |||||| ||| ||| ||| | |||||| ||| | Sbjct 605474 AGTATCTCTTTTCRATTTCAACAGCTTCTGAAATGATTCTYTCAACAAT--CTTTGGATC 605531 Query 23477 TAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCAT 23536 | | | | | || || | ||||| ||||| ||||| ||| |||| ||||| | Sbjct 605532 TGGCTTGTTCTTC-AAGTGRGAGAACAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGT 605590 Query 23537 CCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCC 23596 | || | ||||| || || || || || || || ||||| || ||| || || | || Sbjct 605591 CTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCATCAAACCTTTCTTCTTYAACC 605650 Query 23597 AAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAA 23656 | || || ||||||||||||||||| ||||| | |||||||||||| || || || || | Sbjct 605651 AGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCTCAACAGCAGCGAAAGCAACCA 605710 Query 23657 GACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCA 23716 | | | | |||| || | | || |||||| | | | ||| | ||||| Sbjct 605711 GTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATCTGATGGCCCATTCGGCCTTTT 605770 Query 23717 ATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTG 23776 || | ||| ||||| || || || || | || ||||| | | || Sbjct 605771 CCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAGAATTCGTTTTCCTTAGKGTCCT 605830 Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 | || ||||| || | | ||| || |||| || || || ||||| || || | Sbjct 605831 TGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTT 605890 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 | || || || ||||| | ||||| | | ||| || ||| | | || ||| | | | Sbjct 605891 GGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACYTCAGCAGAGAAATTTTCAACCA 605950 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 | || || || |||||||||||| ||||||||||| || | || ||||| Sbjct 605951 AGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAGGCCAAMACTCTRGAAATAAAGA 606010 Query 23957 GTCTTTC---ATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACT 24012 |||||| ||| || || | || ||||| |||| | ||| || || ||||||| | Sbjct 606011 ATCTTTCGTTTTCA-TTCATTCTGTTGTTCCAGTCATGTAAATCCTTGGACAAATCAATT 606069 Query 24013 TCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCA 24066 || ||| ||||||| ||| || ||| | |||||| | |||||| ||| Sbjct 606070 TCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATARGCTTCCCAAATTTCA 606123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487889183800