Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq14 125 2e-23 seq16 89.7 1e-12 >seq14 Length=450723 Score = 125 bits (138), Expect = 2e-23 Identities = 165/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| |||||||| || || || || || || | ||||| ||| Sbjct 422319 AAAATGC---AAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAA 422263 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || ||||||| | || || || || || ||||||||||| ||||| || Sbjct 422262 TCTTCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCT 422203 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||| || | |||||||| || || || | ||||| || || ||| | | || Sbjct 422202 GAGCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGAC 422143 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| ||||||| ||||| || |||||| | || |||||| | ||| Sbjct 422142 TACAACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGA 422095 >seq16 Length=958289 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || ||||| | || || || || |||||| | || || ||| ||| Sbjct 204171 CAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTTGAATCTAGTGAC 204230 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||| || || || || || || || || ||||| || || || || || ||| Sbjct 204231 TCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAACAA 204290 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || | ||||| || || || | | || || ||| || Sbjct 204291 AGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTACAACATC 204350 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||||||||| ||| | ||||||||| | ||| Sbjct 204351 CAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGA 204389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730937812298