Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 111 3e-19 >seq1 Length=614824 Score = 111 bits (122), Expect = 3e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 319810 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 319869 || |||| ||||||||| |||||| | || | | | || | ||||| || ||| Sbjct 418246 CCATCGATATCGTGTTCAACGTAAACGGTCATACATTCTTCTTTGGTTGGGAAACCATCA 418187 Query 319870 AGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACAC 319929 | || ||||| |||| || | ||||| || |||||||| || |||||||| |||||| Sbjct 418186 ACTTGACCGTTGGCAATGGCTCTCATCAAAGTAGATTTACCAGCACCGTTTGGACCACAC 418127 Query 319930 AGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCA 319989 | |||||| | | | | ||||| | || | || ||||||| | ||||| || Sbjct 418126 AAACCGTATCTTCTAGCTCTTTTCAATCTCAATTGAGTTTTGTTCAACAAGATTTTAGCA 418067 Query 319990 CCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || |||| |||||||||||| | ||||| ||| ||||| Sbjct 418066 CCGTAAGCCAAAGAAAATTCACAGTTACACAAATCTTCACC 418026 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 118909 ATGGGTTATTTTTGACGAAGTTCATTATATCAATGATAAATCCAGGGGTTCTGTATGGGA 118968 ||||||||||||||||||||| ||||| || | || ||| || ||| ||| ||||| Sbjct 79700 ATGGGTTATTTTTGACGAAGTCCATTACATGAGAGACAAAGAAAGAGGTGTTGTTTGGGA 79759 Query 118969 AGAGTCAATCATTTTGATGCCGGATACGATGCGCGCTGtttttttGTCTGCAACGGTTCC 119028 ||| |||| |||||| |||| || | ||| | ||||||||||| || || |||| Sbjct 79760 AGAAACAATTATTTTGTTGCCTGACAAAGTGCACTACGTTTTTTTGTCAGCCACCATTCC 79819 Query 119029 GAACGCGGTTGAATTT 119044 || ||| | || ||| Sbjct 79820 AAATGCGATGGAGTTT 79835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823769592710