Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq14 264 1e-65
>seq14
Length=1659880
Score = 264 bits (292), Expect = 1e-65
Identities = 594/879 (68%), Gaps = 25/879 (3%)
Strand=Plus/Plus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| |||||| ||| | |||||| ||||| || |||||||| | ||||| || ||||
Sbjct 312451 TTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTTTT 312510
Query 15972 CCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCAGTTCCGTAACT 16030
||||||||||||| || || | | | | ||||| || ||||| | | | | |
Sbjct 312511 CCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAA-TGCAACCAAT 312569
Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090
|||||||| || |||||||| | ||||||| ||| || | ||| ||||||| |
Sbjct 312570 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACAAA 312629
Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150
||| || || || | | ||| || || ||| || ||| ||||| |||||||
Sbjct 312630 GATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATGATT 312689
Query 16151 ---TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTT--AGGTGTTTAAACATTAGACACG 16205
|| | | || |||| || || ||| | |||| || | |||||| |
Sbjct 312690 CTTTCAGCAATTTTTGGATCAG-----GTTTGTTTTCCAAATGTTGGAATAATAGACATG 312744
Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265
| || ||| ||| |||||||| ||||| | || | ||| || ||||||||||| ||||
Sbjct 312745 CAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCTG 312804
Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325
|||| || |||||| ||||| || || |||||||| || || |||||||| | ||
Sbjct 312805 GCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACAC 312864
Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385
| || |||| ||||| || | |||| ||| || | ||||||| | ||||||
Sbjct 312865 CTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAATCC 312924
Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445
|| | ||||||| || |||| ||| || | || ||||| ||||| || || |
Sbjct 312925 ATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAATA 312984
Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG--TACATTTC 16503
| || |||| | ||| | ||||| |||||||||| ||| || || ||||
Sbjct 312985 AAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCA--AAAGTGAATAAGTTTC 313042
Query 16504 TGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTG 16563
||| ||||| || || || |||||||| || || ||| || || | |||||
Sbjct 313043 ACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAATTTG 313102
Query 16564 TACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
||||| ||| |||||| ||| ||| || ||||| || || || ||| || |||
Sbjct 313103 CACTTCTGCAC-TAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTGCA 313160
Query 16622 AAAAACGCCAATA-TGTGCTTAATGAAATATTTTTC---GTCAGATGTAAGAATATGCCA 16677
||||| || || | | | | |||||||| || |||| ||| | ||| |||
Sbjct 313161 AAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCA 313219
Query 16678 ATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTT 16737
||| | ||||||||||||| ||| | |||||||| |||||||| ||| ||||
Sbjct 313220 ATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCACG 313279
Query 16738 TTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
|||||| || |||||| |||| |||| || |||||
Sbjct 313280 TTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAA 313318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414291324440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |