Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq16 416 3e-111 seq14 338 7e-88 >seq16 Length=1651669 Score = 416 bits (460), Expect = 3e-111 Identities = 1458/2253 (65%), Gaps = 68/2253 (3%) Strand=Plus/Minus Query 52804 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 ||||| | ||||| |||| ||| || |||| || || | | |||||||| || |||| Sbjct 931322 CAATGGTAAATTGGATGGCAGCAGAAGCGGCTTGGGTTCTCAAGTAGTACATACCTGTTT 931263 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATC- 52920 | | ||| | ||| |||||||||||||| || | ||| || | || | Sbjct 931262 TCAAACCTTTAGACCACCCGTAAAAATGCATGGAGGTCAATTTACCCATGGTTGGGGCCA 931203 Query 52921 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 52980 || || || || |||| ||| ||| |||||| || || ||| |||||||||||||| Sbjct 931202 TG--ATGTGAATGTTCAAAGAATGAGATTGATCAATAAAAGCTGATCTGTCTGCAGCCAT 931145 Query 52981 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 53039 | ||||| || ||||| | | |||||||| ||||| || || || |||| |||| Sbjct 931144 GTCGATGATGGTTTTTTGCGACAATTCCCAAACGGTTTTGTACAAGTCT-TTAAGTTCTT 931086 Query 53040 CTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCT 53096 |||| ||||| || |||||||| || | | ||||| | || || Sbjct 931085 GAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGTTAGCAATAATGTTTGATTTCATGG 931026 Query 53097 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155 |||| | ||| |||| | || ||| ||||||| | | || || || | ||| Sbjct 931025 CATCGTCCCA-AATTCCCAAATCAACCAAATCTCTAAGCAAGTATGGGTTCACAATTTGG 930967 Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215 ||||| |||||||| ||| | || ||| || || ||| | ||||| | | | ||| Sbjct 930966 AATTCCCCAGACAAAGTTCTTCTAGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCA 930907 Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275 || | ||||| ||||| | |||||| || || |||||||| |||| | || ||| Sbjct 930906 TTGTAACCCAAGATTTGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGAGTTT 930847 Query 53276 CTAAGACCGTATGTTC-TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 53334 || | ||| | | ||| ||||||| ||| | | || |||||| | ||||||||| || || Sbjct 930846 CTTAAACC-TGTTTTCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAAGATCTGATGG 930788 Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394 | ||| | || || | || |||||| | | | Sbjct 930787 AGCTCTGTTCCACATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAACGA 930728 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 | |||||| ||||||| | | || | ||| || || || ||| ||| || | Sbjct 930727 TTGGTATGGACCTTCCTCCACGGCCATTTCGTTGGAAGCTTCCAAAGCAGCGTGGTACAA 930668 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTT 53512 |||||||| || | | ||||| | || ||||| ||| |||||||||| | Sbjct 930667 TGTTTCGAAAATTTGAATGTTTAGTTGTTTAGCTTCTTCAGA--ATCAAATGGAACTCTC 930610 Query 53513 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 53572 || || ||||| | ||| || || |||||||| || | | | || |||||||||||| | Sbjct 930609 AAAAGCATAAAAGTGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCTCATG 930550 Query 53573 TTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629 || ||| || ||| ||| | ||||| || || |||| || | | | || | | Sbjct 930549 TTTGAGTTTCTTGCAGTTTCC---ACTGGATAGTAGTTTCTATCAATGACTCTGTTCAAG 930493 Query 53630 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TTGT 53680 ||||| || ||||| | || || | || ||| |||| | | ||| Sbjct 930492 TTTCTTGTGATGACTTTTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGTTTGG 930433 Query 53681 CCATCTATT---AC-------AAACATGTTCAATGCAATAGATGCCAGATTACAAACGGC 53730 ||| | || ||| || | || ||||| || |||| |||||||| || Sbjct 930432 TTRTCTTCTGAAACGTTGATAAAAGCTGGTAAA-GCAATGGAAGCCAAGTTACAAACTGC 930374 Query 53731 ---TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 53787 | | |||||| || | ||||| | || ||| || | ||| | ||||| Sbjct 930373 AGTTTCGTCATTATCA---GAATATTCCACAATTTCACAACACAAATTGGATGATTTGAT 930317 Query 53788 GGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 53847 |||||| || |||| ||| || ||||||||||| ||||| || |||| ||| ||||| Sbjct 930316 GGTTCCCAAGTTTTTTTGGTTGGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGG 930257 Query 53848 CGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTAT 53907 ||||| ||||| | || | ||| | ||| || | ||| | |||| || ||| | Sbjct 930256 TGTACCTGTTTCTGTTTGTGCTTCCAAAATGGCATACCATAATTTTTGAGCTTTAATTGT 930197 Query 53908 AGATTTGTATCTCTTTTCTCTTTCGTATAGTG--TATACAATCGTTCAAACTCGTCTCCC 53965 ||| || ||||| |||| ||| | | || ||| |||||| || | || Sbjct 930196 T--TTTCTACCTCTTCCTTCTTGAACATATTTGTTGTATAATTTTTCAAAATCTTTACCA 930139 Query 53966 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 54025 |||||| ||| |||||| |||| ||| | | || | ||| ||| | || Sbjct 930138 TAAACATCACTCAAACCAGGAGCTTCACTTGGAGAAAATAATGTCCAATCTGAATTTTCT 930079 Query 54026 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 54085 || ||| || |||||| | ||| |||| ||| | || ||| | |||||| | |||| Sbjct 930078 TTAACTTTTTGCATAAATAAATCTGGAACCCACAAGGCAGGAAACAAATCTCTTGCTCTA 930019 Query 54086 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 54145 ||| || || || ||| || || ||| | || | | ||||||| |||||| Sbjct 930018 ATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCAT 929959 Query 54146 GGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 54205 ||||| || || | | | | | ||||| | ||| || || || ||||| | ||||| Sbjct 929958 GGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTT 929899 Query 54206 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCG 54265 || || ||||| ||||||| | ||||||||| | ||||| || | || || || || Sbjct 929898 GCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTTTGTTCCA 929839 Query 54266 GAGATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATCCCCCCTGCCAT 54324 | ||||| || | | | ||||||| ||| ||| ||||| || || || || | Sbjct 929838 GCAATATATGAACCTGTTGATCTAATATTATGAATATGA-AGACCAATTCCACCAGCAGT 929780 Query 54325 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 54384 |||||| || || || ||| |||||| || ||||| || || || || |||||| | Sbjct 929779 TTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATCATCTTT 929720 Query 54385 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 54444 ||| || |||||||| ||||||||| | | ||| || ||||| ||||| || Sbjct 929719 CATAGCAACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAATAATGT 929660 Query 54445 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTC 54504 |||||||| || || || || || || | | ||| || || || | | || || Sbjct 929659 TGGAGAAGCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAACTTTYTC 929600 Query 54505 TATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 54562 ||||| ||| ||||||||| || || || | ||| | || || || ||||||||| Sbjct 929599 AATATC--ATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCA 929542 Query 54563 ACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 54622 | || | | || ||| | | || || ||| |||| |||||||||||||||||||| Sbjct 929541 GCAATTTGGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAA 929482 Query 54623 TTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTA 54682 |||||| ||| |||| || |||| |||| | || | | ||| |||| ||| | | Sbjct 929481 TTGTATTGAAAATCTCTATCATAAACAATAGCACTATTTAATACATCTTTATTTTTTTCA 929422 Query 54683 AC---TACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTG 54739 || | || | | | ||| ||| || ||||| | | |||||||| ||| Sbjct 929421 ACAATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTA 929365 Query 54740 ACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGA 54799 | ||| | ||||||| || |||| | |||| ||||||| |||| ||| |||| | Sbjct 929364 ATATAAAAATATAAATCAGAAATAACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAA 929305 Query 54800 TTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTG 54859 || || | || ||||| || || | | |||||||| ||||| ||||| | Sbjct 929304 TTGGAAATTGCAATTCTTGCAGCCAATGTTGCATAATCAGGATGAATAGTAGTCATATAA 929245 Query 54860 GCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 54919 || | |||| || | || | | |||||||| | || || || || | ||| | || Sbjct 929244 GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACCCCTTCATAAACACCA 929185 Query 54920 TGGAT-AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACA 54978 || | ||| | | || || |||||| ||||| | | | || |||||||| Sbjct 929184 GAAATGATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCCAAACCATAACA 929126 Query 54979 TAATTTTCTAATACGAGATGTGATTTTATCAAA 55011 |||| | || | ||| |||||||||||||| Sbjct 929125 TAATCTGGCTATTCTAGAAGTGATTTTATCAAA 929093 >seq14 Length=1659880 Score = 338 bits (374), Expect = 7e-88 Identities = 625/906 (69%), Gaps = 18/906 (2%) Strand=Plus/Plus Query 23825 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 23884 || || ||| || || |||||| || ||| || | |||||| || ||||| ||||| Sbjct 312431 TTTAGCCATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTT 312490 Query 23885 ACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTT 23944 ||| | || || || |||||||| ||||| |||| |||| |||||| || || |||| Sbjct 312491 TCCTGCCAAAGAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTA-ATATTTTT 312549 Query 23945 AAAT-CCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTT 24003 | |||||| || | |||||||| || ||||| |||| |||| ||||||| Sbjct 312550 CGTTACCCAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAG 312609 Query 24004 CACAATTCATTCCTAT--AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAAT 24061 || ||||||||||| ||| | || || || || | || | || || |||||| Sbjct 312610 CAGCATTCATTCCTAACAAAGAT--ACAGGTAGTGCATCTTCAAAATATCTTTTTTCAAT 312667 Query 24062 AGAGACCGCGTCTGTTATAATAGATCTTACTGT--TTCTTCACTC-GGTGGATACAATAA 24118 ||| || || || || || || |||| | | || || || ||| | || Sbjct 312668 AGAAACTGCTTCAGTAATGAT---TCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCCAA 312724 Query 24119 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 24178 ||||| || | | |||||| |||||| || || || || ||||||| ||| ||||| Sbjct 312725 ATGTTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTC 312784 Query 24179 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 24238 || ||||| || | || ||||| | || || || | |||||| || | ||||| Sbjct 312785 ATTTGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAA 312844 Query 24239 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACC 24298 |||||||||||||||| ||||| || || ||||| || | | |||||| || || Sbjct 312845 GGATCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAG 312904 Query 24299 GGCG-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 24355 || || ||| || ||||| | |||||| || ||||| | ||| | ||| || Sbjct 312905 TGCATCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAAT 312964 Query 24356 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 24415 ||| || || ||||| || | | | | |||| || |||||| | ||| |||||||| Sbjct 312965 TGTTTCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAAT 313024 Query 24416 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 24475 |||||| ||| |||| ||||||||||| || |||||||||||||| ||||| Sbjct 313025 CAAAAGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACA 313084 Query 24476 TCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTAT 24535 | | || || | ||| || |||||| || ||| ||| | ||||||||||| || || Sbjct 313085 TTTGGCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAAT 313144 Query 24536 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 24595 ||| ||| ||||||||||| || || || | || ||| || |||| | | | Sbjct 313145 TCCATCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATT 313204 Query 24596 TAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 24652 | | ||||||||||| | | |||||| |||| ||| | |||||| | |||||||| Sbjct 313205 CATTCTGTTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAA 313264 Query 24653 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAAC 24712 || || ||||| |||||| | ||| || |||||||||| |||||||| | ||| Sbjct 313265 AGAAGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAAC 313324 Query 24713 AAATCT 24718 |||||| Sbjct 313325 AAATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721473834160