Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq15 95.1 1e-14
seq17 86.0 5e-12
>seq15
Length=1932387
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|||||||||||||| ||||| ||||||| || ||| | |||| |||| |||||| ||
Sbjct 1577071 GTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGTTTACCA 1577012
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || | ||| || ||||| || | ||||| ||||| |||||| ||
Sbjct 1577011 GCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTGGACTTG 1576952
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || || || ||| ||||| || ||||| || || || || |||
Sbjct 1576951 ACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGTTTTCCCAGTCAATGTT 1576892
Query 21159 TTGACAAATATTTGCAT 21175
|| || || ||||||||
Sbjct 1576891 TTAACGAAAATTTGCAT 1576875
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|||||||||||||| ||||| ||||||| || ||| | |||| |||| |||||| ||
Sbjct 1576843 GTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGTTTACCA 1576784
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || | ||| || ||||| || | || || ||||| |||||| ||
Sbjct 1576783 GCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTTGTCTTGGATCTTGGACTTG 1576724
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || || | || ||||| || |||||||| || || || |||
Sbjct 1576723 ACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGATGGTCTTCCCAGTCAATGTT 1576664
Query 21159 TTGACAAATATTTGCATTTT 21178
|| || || |||||||||||
Sbjct 1576663 TTAACGAAAATTTGCATTTT 1576644
>seq17
Length=834807
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| ||| | ||||| || ||||||||||| ||||| | |
Sbjct 25747 CCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGAC 25688
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | || |||| ||||| || ||| | || | ||| || ||||| ||
Sbjct 25687 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 25628
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| ||||| ||| || ||| || | | | | ||| ||| | || |
Sbjct 25627 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACT 25568
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|||| ||||||||| || || || || ||||| || || |||||||| |||
Sbjct 25567 TCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTG 25517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259112513172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |