Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq15 95.1 1e-14 seq17 86.0 5e-12 >seq15 Length=1932387 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||| ||||| ||||||| || ||| | |||| |||| |||||| || Sbjct 1577071 GTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGTTTACCA 1577012 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | ||| || ||||| || | ||||| ||||| |||||| || Sbjct 1577011 GCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTGGACTTG 1576952 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| ||||| || ||||| || || || || ||| Sbjct 1576951 ACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGTTTTCCCAGTCAATGTT 1576892 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 1576891 TTAACGAAAATTTGCAT 1576875 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||| ||||| ||||||| || ||| | |||| |||| |||||| || Sbjct 1576843 GTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGTTTACCA 1576784 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | ||| || ||||| || | || || ||||| |||||| || Sbjct 1576783 GCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTTGTCTTGGATCTTGGACTTG 1576724 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | || ||||| || |||||||| || || || ||| Sbjct 1576723 ACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGATGGTCTTCCCAGTCAATGTT 1576664 Query 21159 TTGACAAATATTTGCATTTT 21178 || || || ||||||||||| Sbjct 1576663 TTAACGAAAATTTGCATTTT 1576644 >seq17 Length=834807 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || | |||| ||| | ||||| || ||||||||||| ||||| | | Sbjct 25747 CCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGAC 25688 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | || |||| ||||| || ||| | || | ||| || ||||| || Sbjct 25687 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 25628 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||| || ||| || | | | | ||| ||| | || | Sbjct 25627 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACT 25568 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| ||||||||| || || || || ||||| || || |||||||| ||| Sbjct 25567 TCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTG 25517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259112513172