Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq17 129 5e-25
seq15 113 4e-20
seq2 102 7e-17
>seq17
Length=834807
Score = 129 bits (142), Expect = 5e-25
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| | ||||| ||||| || |||||||||||| ||| ||| |
Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || |||| ||||| || ||||||||| | || ||
Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || ||||||||||||||| | |||| || | || |||
Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| |||||||| ||||| || ||||| |||| || |||| |||| ||
Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747
>seq15
Length=1932387
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090
|||||||||||| ||| | ||||||||||| || || ||||| || ||| ||| |
Sbjct 1576643 AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATC 1576702
Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150
|||| ||| | | | | ||||| || || || ||||| || | || |||
Sbjct 1576703 TTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGA 1576762
Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210
||||||||| | |||||||| || ||||| |||||||| || |||| || | || ||
Sbjct 1576763 CCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTA 1576822
Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262
||| || |||||||| || || ||||| | || || |||| |||| |||
Sbjct 1576823 CAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGGG 1576874
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| | ||||||||||| || |||||||| || ||| || || |
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| ||| | | | | ||||| || || || |||||||| | || ||| |||
Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | |||||||| || ||||| |||||||| || |||| || | || |||||
Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| |||||||| || || ||||| | || || |||| |||| ||
Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101
>seq2
Length=821690
Score = 102 bits (112), Expect = 7e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| ||||||||| | || || ||||||||| | |||||||| || ||||||||||||
Sbjct 193732 GACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAA 193791
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | |||| || | || ||||| |||||||| ||||| |||||||| |||| ||
Sbjct 193792 GATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATCCACTCTTCATTTGGTTTTG 193851
Query 25248 CGATTACGAGGAGG 25261
|||| |||| ||
Sbjct 193852 AGATTGAGAGGTGG 193865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796714888038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |