Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq16 187 2e-42 >seq16 Length=1651669 Score = 187 bits (206), Expect = 2e-42 Identities = 343/504 (68%), Gaps = 23/504 (5%) Strand=Plus/Minus Query 97036 TGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATA 97095 || ||| | | ||| |||| ||||| ||||| ||| || || || ||||||||||| Sbjct 124380 TGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGGGCGTCACCCAAAGTGTGAATG 124321 Query 97096 AATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTA 97155 ||||| |||||| | | |||| || | ||| ||||| ||||| || | |||| Sbjct 124320 AATTCACCAGGATCCATATCACAAACTTTGGCAATCATTTTAGTTAGCAGTGCATAGGAT 124261 Query 97156 GCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAA 97215 |||||||| || || ||||||| ||||||||| |||||||| |||| ||| ||| Sbjct 124260 GCAATGTTGAATGGGACCCCTAAACCCATATCACAAGATCTTTGGTATAGAACACATGAA 124201 Query 97216 AGCTT---------------TCCATCA------CACACATAAAACTGACTCAATACATGA 97254 || || | | | | | ||||||||| ||||| || ||||| Sbjct 124200 AGTTTAGGACGGGCGTTTTCTTCTTTAGGAAAGCTCACATAAAATTGACTGAAAACATGG 124141 Query 97255 CAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTT 97314 || || ||||| ||||||||| | |||| |||||||||| || | |||||| Sbjct 124140 CAAGGAGGCAAAGCCATTTTTTTGAAATCTGGAGGGTTCCAAGCACTCAAGATAATTCTT 124081 Query 97315 CTATCGGTTGGGTTTGTGTGTATGGTATTA-ATTATCTGCTTTAATTGATCAACGCCTTC 97373 || ||| |||||| |||| | | | || || | || | ||||||| ||| | Sbjct 124080 CTGTCGTATGGGTT-GTGTTTCAGTTTGTATATAACCTCAGCCAGTTGATCATAGCCCTG 124022 Query 97374 TCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCC 97433 ||| |||| |||| | | || ||||||||||||||||| |||||||| || || Sbjct 124021 GCCATCATAGTTGTCGTCACATGTTTTGTATTCTGCTCCAAAATGTCTCCATTGAAACCC 123962 Query 97434 ATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGA 97493 ||||||||| ||||| || |||||| |||||| | ||| | |||| | ||| Sbjct 123961 ATAAACAGGACCAAGATCACCTTCTCTTCTATCTGTCAGACCTAAACTATCGAGATATTC 123902 Query 97494 CCTAGATCCATTTGCATCCCAAAT 97517 ||| |||||||| | ||||| || Sbjct 123901 CCTTGATCCATTCCCTTCCCAGAT 123878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783928150690