Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq17 143 4e-29
seq2 127 3e-24
>seq17
Length=834807
Score = 143 bits (158), Expect = 4e-29
Identities = 173/236 (73%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | ||||| ||||| || || | || ||||| | |
Sbjct 25521 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCT 25580
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | ||| ||||| ||||| ||||||||||| |||||||| |||
Sbjct 25581 GACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAA 25640
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || |||||||| || ||| || |||| || || || ||
Sbjct 25641 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 25700
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|||||||||||||| || | ||||||||||| | || |||||||| ||||||
Sbjct 25701 ATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAA 25756
>seq2
Length=821690
Score = 127 bits (140), Expect = 3e-24
Identities = 117/148 (79%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
||||| ||||| ||||||||||| |||||||| |||||||| | || ||||| || |||
Sbjct 193723 AAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAA 193782
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||||| || ||| || |||| || || || || |||||||||||||| ||| | |||
Sbjct 193783 CAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATCCACTCTTCAT 193842
Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTA 124770
|||||||| | || |||||||| |||
Sbjct 193843 TTGGTTTTGAGATTGAGAGGTGGTGTTA 193870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455839465600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |