Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq14 363 1e-95 >seq14 Length=1659880 Score = 363 bits (402), Expect = 1e-95 Identities = 629/897 (70%), Gaps = 24/897 (3%) Strand=Plus/Plus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 ||||||||| ||| |||||| |||||||||||||||||||||||| | || || || || Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAAC 16060 ||||||||||||||| || || |||| | | ||||| ||| |||||| | | | Sbjct 312509 TTCCATAAAATCAAATGGGTTGGA--AACATTGTAATATTTTTCGTTACCCAATGCAACC 312566 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 ||||||||||| || |||||||| | ||| || ||||| ||| || |||||||||| Sbjct 312567 AATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAAC 312626 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAt-ttttttCTATATTAACCGCTTCAATGAT 16179 || ||||| | ||| ||| | |||| || ||||||| ||| ||| |||||| | || Sbjct 312627 AAAGATACAGGTAGTGCATCT-TCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAAT 312685 Query 16180 TATATCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACA 16236 || |||| | || | ||| ||| |||| || |||| || | || ||| Sbjct 312686 GAT---TCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACA 312742 Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296 |||||||| ||||| |||||| || |||| || || || |||||||| || | ||| Sbjct 312743 TGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACC 312802 Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356 |||||| | || ||| || | |||||| || || ||||| || ||||||||||| | Sbjct 312803 TGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAAC 312862 Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416 |||||| || || |||||||| ||||||| ||| | | | || || || || Sbjct 312863 ACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAAT 312922 Query 16417 ccattttttagcccaatttgctttttgttt-AACACAGTTCATGTTCTCTATTGCATTAA 16475 |||| | ||||||| | ||| |||| ||| | || |||| || || ||||| | Sbjct 312923 CCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTT-TCAATGGCATTGA 312981 Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACT--ATACAT 16533 ||||| ||| ||||||| |||| ||||||||||| || | ||| | ||| | Sbjct 312982 ATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCA--AAAGTGAATAAGT 313039 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 ||| ||||| || ||||| || ||||| || ||||| ||| | ||||| | || Sbjct 313040 TTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAAT 313099 Query 16594 TTGTACTTCAG-AGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTG 16652 ||| ||||| | | ||||| |||| | || ||||| ||||| |||||||| ||||| Sbjct 313100 TTGCACTTCTGCACTAAAA-TTTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTG 313158 Query 16653 CAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTTA-ACC 16709 ||||||| || | | |||| ||| | |||| || || | | | ||| || Sbjct 313159 CAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCC 313218 Query 16710 AGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769 | || |||||||| |||| ||| | |||||| |||||||||||||||| | || Sbjct 313219 AATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCAC 313278 Query 16770 TTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA-CTTATTT 16825 |||||| || ||| || || | || || ||||||| |||| | ||| ||| Sbjct 313279 GTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTTCTTT 313335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511901716200