Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq17 91.5 1e-13 seq15 82.4 6e-11 seq2 82.4 6e-11 >seq17 Length=834807 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || ||||| || || ||| || || |||||||||||||| | Sbjct 25747 CCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGAC 25688 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | | || |||| |||||| || || || ||||| | |||||||| || | Sbjct 25687 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 25630 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| || ||||| ||||| || || | | |||| | || | Sbjct 25629 GAATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAA 25570 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | |||| |||||| || || || |||| ||| || || || |||||||| ||| Sbjct 25569 CTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTG 25517 >seq15 Length=1932387 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/136 (74%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || || || || |||||| |||||| || ||||||||||| | Sbjct 1576873 CCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1576814 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | |||| |||| ||||| || || || ||||| | |||||||| || | Sbjct 1576813 AAAGTT--CTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 1576756 Query 45228 GCACACCCTCCTTGTC 45243 | | ||||| ||||| Sbjct 1576755 GAATCCCCTCTTTGTC 1576740 >seq2 Length=821690 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/136 (74%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || ||||| || || ||| || || |||||||||||||| | Sbjct 193865 CCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 193806 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | | || |||| |||||| || || || ||||| | |||||||| || | Sbjct 193805 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 193748 Query 45228 GCACACCCTCCTTGTC 45243 | | ||| || ||||| Sbjct 193747 GAATACCTTCTTTGTC 193732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075118145357