Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq14 378 7e-100 >seq14 Length=1659880 Score = 378 bits (418), Expect = 7e-100 Identities = 631/894 (71%), Gaps = 25/894 (3%) Strand=Plus/Plus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||||||||| ||| |||||||||||||||||| || ||||| ||| ||| || || || Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAAT 14029 |||||||||||||||||| || | |||| || | ||| || ||| | | | | Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAA-ACATTGTAATATTTT-TCGTTACCCAATGCAACC 312566 Query 14030 AGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 14089 | ||||||||| |||| || || | ||||||| ||| ||| || |||||| |||| Sbjct 312567 AATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAAC 312626 Query 14090 AGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACAGCCTCGTTTA 14147 | |||||| | | || || ||||| ||||||| | ||||| || || || | | Sbjct 312627 AAAGATACAGGTAGTGCATC--TTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAA 312684 Query 14148 TAATAATCGTAATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACA 14205 | || | | ||||| || || | | |||| | ||||| || | || ||| Sbjct 312685 TGATTCTTTCAGCAATTT--TTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACA 312742 Query 14206 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 14265 |||||||| ||| || || |||||||||| ||| | ||| |||||||| ||||| || Sbjct 312743 TGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACC 312802 Query 14266 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 14325 ||||||||| || ||| || |||||||| |||||||| || ||||| |||||||| | Sbjct 312803 TGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAAC 312862 Query 14326 TCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATA 14384 || || || |||||||| || | |||| ||| |||| ||| | || || | || | Sbjct 312863 ACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGA-A 312921 Query 14385 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAA 14444 ||||| | |||||||||| | |||| ||| || | ||||||||||| ||||| | Sbjct 312922 TCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGA 312981 Query 14445 ATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT---AAGTAAGCTATACA 14501 ||||| || | ||||| | | | || || |||||||| |||| | ||| Sbjct 312982 ATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGA---ATAAG 313038 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561 ||||| ||| ||||||||||| || ||||| || ||||||||| | ||||| | Sbjct 313039 TTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAA 313098 Query 14562 ATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620 ||| || |||| | |||||| |||| |||||||||||||||| || |||||| |||| Sbjct 313099 TTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCT 313157 Query 14621 GCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTGAGTTTTTTC 14677 ||||||||||| || | | |||| ||| | || | | |||||| | || ||| Sbjct 313158 GCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 313217 Query 14678 CAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCT 14737 |||||| ||||| || || ||||| | ||| || | ||||||||| ||| | || Sbjct 313218 CAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCA 313277 Query 14738 TTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 |||||| | ||| ||||| | |||| || ||||| | ||||||||| Sbjct 313278 CGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTT 313331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345497501560