Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq14 378 7e-100
>seq14
Length=1659880
Score = 378 bits (418), Expect = 7e-100
Identities = 631/894 (71%), Gaps = 25/894 (3%)
Strand=Plus/Plus
Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971
||||||||| ||| |||||||||||||||||| || ||||| ||| ||| || || ||
Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508
Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAAT 14029
|||||||||||||||||| || | |||| || | ||| || ||| | | | |
Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAA-ACATTGTAATATTTT-TCGTTACCCAATGCAACC 312566
Query 14030 AGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 14089
| ||||||||| |||| || || | ||||||| ||| ||| || |||||| ||||
Sbjct 312567 AATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAAC 312626
Query 14090 AGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACAGCCTCGTTTA 14147
| |||||| | | || || ||||| ||||||| | ||||| || || || | |
Sbjct 312627 AAAGATACAGGTAGTGCATC--TTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAA 312684
Query 14148 TAATAATCGTAATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACA 14205
| || | | ||||| || || | | |||| | ||||| || | || |||
Sbjct 312685 TGATTCTTTCAGCAATTT--TTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACA 312742
Query 14206 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 14265
|||||||| ||| || || |||||||||| ||| | ||| |||||||| ||||| ||
Sbjct 312743 TGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACC 312802
Query 14266 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 14325
||||||||| || ||| || |||||||| |||||||| || ||||| |||||||| |
Sbjct 312803 TGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAAC 312862
Query 14326 TCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATA 14384
|| || || |||||||| || | |||| ||| |||| ||| | || || | || |
Sbjct 312863 ACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGA-A 312921
Query 14385 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAA 14444
||||| | |||||||||| | |||| ||| || | ||||||||||| ||||| |
Sbjct 312922 TCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGA 312981
Query 14445 ATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT---AAGTAAGCTATACA 14501
||||| || | ||||| | | | || || |||||||| |||| | |||
Sbjct 312982 ATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGA---ATAAG 313038
Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561
||||| ||| ||||||||||| || ||||| || ||||||||| | ||||| |
Sbjct 313039 TTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAA 313098
Query 14562 ATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620
||| || |||| | |||||| |||| |||||||||||||||| || |||||| ||||
Sbjct 313099 TTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCT 313157
Query 14621 GCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTGAGTTTTTTC 14677
||||||||||| || | | |||| ||| | || | | |||||| | || |||
Sbjct 313158 GCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 313217
Query 14678 CAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCT 14737
|||||| ||||| || || ||||| | ||| || | ||||||||| ||| | ||
Sbjct 313218 CAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCA 313277
Query 14738 TTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791
|||||| | ||| ||||| | |||| || ||||| | |||||||||
Sbjct 313278 CGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTT 313331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345497501560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |