Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq17 131 1e-25 seq15 100 2e-16 seq2 100 2e-16 >seq17 Length=834807 Score = 131 bits (144), Expect = 1e-25 Identities = 180/247 (73%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 18085 TTTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTG 18142 ||||||||| ||| | | || | | ||| | |||| ||||| || ||||||||||| Sbjct 25762 TTTCTTTTT-TTACCACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTG 25704 Query 18143 AATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202 |||||||||||| | || ||| ||| ||||||||||||||| || ||| |||| | ||| Sbjct 25703 AATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCT 25644 Query 18203 TTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAG 18261 |||||| || || | ||||| || || |||| | || ||||| | ||| || Sbjct 25643 TTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTT-TGGCTTTGACATTGTCAATAG 25585 Query 18262 TGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTT 18321 ||||| | || ||| | ||| ||| |||| || ||||| ||||| || ||||||| Sbjct 25584 TGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTT 25525 Query 18322 GCATTTT 18328 |||| || Sbjct 25524 GCATCTT 25518 >seq15 Length=1932387 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| || || || ||||| ||||||||||| | || ||| | | |||||||| ||| Sbjct 1577077 TGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGT 1577018 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| |||| | ||||||||| || || | ||||| || || || | Sbjct 1577017 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTG 1576958 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 |||||| | | | ||||| || |||| ||| | |||||| |||| || ||| Sbjct 1576957 GACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGTTTTCCCAGTC 1576898 Query 18303 AATGTTTTTACAAAAATTTGCAT 18325 |||||||| || ||||||||||| Sbjct 1576897 AATGTTTTAACGAAAATTTGCAT 1576875 >seq2 Length=821690 Score = 100 bits (110), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||||| || ||||||||||||||||||||||| | || ||| ||| ||||||| Sbjct 193847 ACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 193788 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || ||| |||| | ||||||||| || || | ||||| || || Sbjct 193787 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGG 193728 Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| | || ||||| | | | ||||| | ||| ||| | |||||| | || Sbjct 193727 ATTT-TGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGTCTT 193669 Query 18296 GCCGGTCAATGTTTTTACAAAA 18317 || || || ||||| |||||| Sbjct 193668 ACCAGTTAAGGTTTTGACAAAA 193647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343921404665