Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq17 131 1e-25
seq15 100 2e-16
seq2 100 2e-16
>seq17
Length=834807
Score = 131 bits (144), Expect = 1e-25
Identities = 180/247 (73%), Gaps = 5/247 (2%)
Strand=Plus/Minus
Query 18085 TTTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTG 18142
||||||||| ||| | | || | | ||| | |||| ||||| || |||||||||||
Sbjct 25762 TTTCTTTTT-TTACCACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTG 25704
Query 18143 AATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202
|||||||||||| | || ||| ||| ||||||||||||||| || ||| |||| | |||
Sbjct 25703 AATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCT 25644
Query 18203 TTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAG 18261
|||||| || || | ||||| || || |||| | || ||||| | ||| ||
Sbjct 25643 TTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTT-TGGCTTTGACATTGTCAATAG 25585
Query 18262 TGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTT 18321
||||| | || ||| | ||| ||| |||| || ||||| ||||| || |||||||
Sbjct 25584 TGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTT 25525
Query 18322 GCATTTT 18328
|||| ||
Sbjct 25524 GCATCTT 25518
>seq15
Length=1932387
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182
||||| || || || ||||| ||||||||||| | || ||| | | |||||||| |||
Sbjct 1577077 TGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGT 1577018
Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242
|| || ||| |||| | ||||||||| || || | ||||| || || || |
Sbjct 1577017 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTG 1576958
Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302
|||||| | | | ||||| || |||| ||| | |||||| |||| || |||
Sbjct 1576957 GACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGTTTTCCCAGTC 1576898
Query 18303 AATGTTTTTACAAAAATTTGCAT 18325
|||||||| || |||||||||||
Sbjct 1576897 AATGTTTTAACGAAAATTTGCAT 1576875
>seq2
Length=821690
Score = 100 bits (110), Expect = 2e-16
Identities = 145/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||||| || ||||||||||||||||||||||| | || ||| ||| |||||||
Sbjct 193847 ACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 193788
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | ||||||||| || || | ||||| || ||
Sbjct 193787 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGG 193728
Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295
|||| | || ||||| | | | ||||| | ||| ||| | |||||| | ||
Sbjct 193727 ATTT-TGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGTCTT 193669
Query 18296 GCCGGTCAATGTTTTTACAAAA 18317
|| || || ||||| ||||||
Sbjct 193668 ACCAGTTAAGGTTTTGACAAAA 193647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343921404665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |