Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14 188 6e-43 seq17 134 1e-26 seq16 107 2e-18 seq2 104 2e-17 seq15 91.5 1e-13 >seq14 Length=1659880 Score = 188 bits (208), Expect = 6e-43 Identities = 402/596 (67%), Gaps = 7/596 (1%) Strand=Plus/Minus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 |||||||| ||||||| || |||||| || |||||| | || ||| |||||| Sbjct 313330 AGATTTGTTTTGTTTCCAATCAAATATCATGAAATTTGGCAAGCTTATAAACGTGCAGAA 313271 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 || || |||||||| | |||||| | || || || || ||| || ||||||| || | Sbjct 313270 GCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGGAATAAC 313211 Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713 | || ||| ||| ||| ||| |||| || || || ||||| || || || Sbjct 313210 AGAATGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTTGCAGCTTCT 313151 Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773 ||||| |||||||| || |||||||| |||| ||| |||||||||| | | || Sbjct 313150 GATGGAATTGTTAATGAAAATTTGGTTGAAAATTTTAGTGCAGAAGTGCAAATTCCTGAA 313091 Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833 || | ||| ||||||||||||||| | || |||||| | || |||| ||||| Sbjct 313090 GCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAAACTTATTCA 313031 Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAA-CG-TAGACTGTTCAACGCGA 57891 || | || ||||| || | || | | | | ||||| || | | ||||| || | Sbjct 313030 CTTTTGATTGATACTTATATCAA--AGATCCAAAAGAAAGCGATTTTTTATTCAATGCCA 312973 Query 57892 TCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCG 57951 | |||||||| || ||| | |||||||| ||| | || | |||||| || || Sbjct 312972 TTGAAACAATTCCTCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATTCAAGACG 312913 Query 57952 CCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTT 58011 || || || || || | | || || || || || |||||| | ||||||| Sbjct 312912 AAGATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTTTTCTTTT 312853 Query 58012 CGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071 | || |||||| ||||| |||||| |||||||| || ||||||| || | || | Sbjct 312852 CTGGATCCTTTGCTGCAATCTTTTGGTTGAAGAAAAAGGGGTTGATGCCAGGTTTAACTT 312793 Query 58072 TTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTA 58127 || || || ||||| | | || || || || ||||| |||||||| || ||| Sbjct 312792 TTTCAAATGAATTGATTTGTAGAGATGAAGGACTGCATACCGATTTTGCATGTCTA 312737 >seq17 Length=834807 Score = 134 bits (148), Expect = 1e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| || ||| ||||||| ||||| || ||| | || |||||| | Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | |||||| | ||| ||||| ||||| | || || ||| Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || || ||||| ||||| |||||||| || ||| || || || Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||||||||||| || |||||| |||| | ||| |||| || ||| Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGGT 25748 >seq16 Length=1651669 Score = 107 bits (118), Expect = 2e-18 Identities = 326/504 (65%), Gaps = 0/504 (0%) Strand=Plus/Minus Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514 |||||| || || | |||| ||||| || || ||||| ||||| || || ||||| || Sbjct 929965 ATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAAC 929906 Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574 || | || || || ||| | ||||| | ||| || | | || || || | ||| Sbjct 929905 ATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTT 929846 Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634 | || || | | |||||| ||| || || || |||| || | ||| || || || Sbjct 929845 TGTTCCAGCAATATATGAACCTGTTGATCTAATATTATGAATATGAAGACCAATTCCACC 929786 Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694 | | ||| || |||| || |||| ||| | |||||| || || || || || || Sbjct 929785 AGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATC 929726 Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754 ||||| | || || | ||||| ||||||||||| | | | || ||| | || ||| Sbjct 929725 ATCTTTCATAGCAACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAA 929666 Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814 | ||| || || || || || |||| ||||| | ||| || || || | | Sbjct 929665 TAATGTTGGAGAAGCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAAC 929606 Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874 ||||| || | || || || || | || || | ||| |||| | ||| ||||| Sbjct 929605 TTTYTCAATATCATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCT 929546 Query 23875 CTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 || | | ||| || ||| | || | ||| || | || | |||||||| ||||| Sbjct 929545 TTCAGCAATTTGGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAA 929486 Query 23935 ATAGTCATAGTTAAAGTCACGATC 23958 ||| | || | ||| || | ||| Sbjct 929485 ATAATTGTATTGAAAATCTCTATC 929462 >seq2 Length=821690 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 ||| || || || | || || || || |||||| | || || ||| | ||||||| | Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCAT 193706 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | |||||| | ||| ||||| ||||| | || || ||||| || | | Sbjct 193707 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || ||||| ||||| |||||||| || ||| || || || ||||||||||| Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826 Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||||| ||||||||| |||| | ||| |||| || ||| Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGGT 193866 >seq15 Length=1932387 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || ||||| ||||| | || || || | || Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| ||||| | || || ||||| Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || ||||| ||||||||||||||| | ||| || || || ||| Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||| || || || |||||| | || | ||| |||| || ||| Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGGT 1577102 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||||||||| || || |||| || || || ||||| | || || ||| | Sbjct 1576643 AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATC 1576702 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | ||||| | || ||||| || || | || || || Sbjct 1576703 TTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGA 1576762 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||| || | | || || ||||| ||||||||||||||| | ||| || || || Sbjct 1576763 CCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTA 1576822 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || || |||||| | || | ||| |||| || || Sbjct 1576823 CAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766305274640