Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq14 188 6e-43
seq17 134 1e-26
seq16 107 2e-18
seq2 104 2e-17
seq15 91.5 1e-13
>seq14
Length=1659880
Score = 188 bits (208), Expect = 6e-43
Identities = 402/596 (67%), Gaps = 7/596 (1%)
Strand=Plus/Minus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
|||||||| ||||||| || |||||| || |||||| | || ||| ||||||
Sbjct 313330 AGATTTGTTTTGTTTCCAATCAAATATCATGAAATTTGGCAAGCTTATAAACGTGCAGAA 313271
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656
|| || |||||||| | |||||| | || || || || ||| || ||||||| || |
Sbjct 313270 GCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGGAATAAC 313211
Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713
| || ||| ||| ||| ||| |||| || || || ||||| || || ||
Sbjct 313210 AGAATGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTTGCAGCTTCT 313151
Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773
||||| |||||||| || |||||||| |||| ||| |||||||||| | | ||
Sbjct 313150 GATGGAATTGTTAATGAAAATTTGGTTGAAAATTTTAGTGCAGAAGTGCAAATTCCTGAA 313091
Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833
|| | ||| ||||||||||||||| | || |||||| | || |||| |||||
Sbjct 313090 GCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAAACTTATTCA 313031
Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAA-CG-TAGACTGTTCAACGCGA 57891
|| | || ||||| || | || | | | | ||||| || | | ||||| || |
Sbjct 313030 CTTTTGATTGATACTTATATCAA--AGATCCAAAAGAAAGCGATTTTTTATTCAATGCCA 312973
Query 57892 TCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCG 57951
| |||||||| || ||| | |||||||| ||| | || | |||||| || ||
Sbjct 312972 TTGAAACAATTCCTCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATTCAAGACG 312913
Query 57952 CCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTT 58011
|| || || || || | | || || || || || |||||| | |||||||
Sbjct 312912 AAGATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTTTTCTTTT 312853
Query 58012 CGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071
| || |||||| ||||| |||||| |||||||| || ||||||| || | || |
Sbjct 312852 CTGGATCCTTTGCTGCAATCTTTTGGTTGAAGAAAAAGGGGTTGATGCCAGGTTTAACTT 312793
Query 58072 TTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTA 58127
|| || || ||||| | | || || || || ||||| |||||||| || |||
Sbjct 312792 TTTCAAATGAATTGATTTGTAGAGATGAAGGACTGCATACCGATTTTGCATGTCTA 312737
>seq17
Length=834807
Score = 134 bits (148), Expect = 1e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || ||| ||||||| ||||| || ||| | || |||||| |
Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | |||||| | ||| ||||| ||||| | || || |||
Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| ||||| |||||||| || ||| || || ||
Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||||||||||||||| || |||||| |||| | ||| |||| || |||
Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGGT 25748
>seq16
Length=1651669
Score = 107 bits (118), Expect = 2e-18
Identities = 326/504 (65%), Gaps = 0/504 (0%)
Strand=Plus/Minus
Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514
|||||| || || | |||| ||||| || || ||||| ||||| || || ||||| ||
Sbjct 929965 ATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAAC 929906
Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574
|| | || || || ||| | ||||| | ||| || | | || || || | |||
Sbjct 929905 ATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTT 929846
Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634
| || || | | |||||| ||| || || || |||| || | ||| || || ||
Sbjct 929845 TGTTCCAGCAATATATGAACCTGTTGATCTAATATTATGAATATGAAGACCAATTCCACC 929786
Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694
| | ||| || |||| || |||| ||| | |||||| || || || || || ||
Sbjct 929785 AGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATC 929726
Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754
||||| | || || | ||||| ||||||||||| | | | || ||| | || |||
Sbjct 929725 ATCTTTCATAGCAACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAA 929666
Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814
| ||| || || || || || |||| ||||| | ||| || || || | |
Sbjct 929665 TAATGTTGGAGAAGCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAAC 929606
Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874
||||| || | || || || || | || || | ||| |||| | ||| |||||
Sbjct 929605 TTTYTCAATATCATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCT 929546
Query 23875 CTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
|| | | ||| || ||| | || | ||| || | || | |||||||| |||||
Sbjct 929545 TTCAGCAATTTGGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAA 929486
Query 23935 ATAGTCATAGTTAAAGTCACGATC 23958
||| | || | ||| || | |||
Sbjct 929485 ATAATTGTATTGAAAATCTCTATC 929462
>seq2
Length=821690
Score = 104 bits (114), Expect = 2e-17
Identities = 155/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || || || | || || || || |||||| | || || ||| | ||||||| |
Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCAT 193706
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | |||||| | ||| ||||| ||||| | || || ||||| || | |
Sbjct 193707 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| ||||| |||||||| || ||| || || || |||||||||||
Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826
Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||| ||||||||| |||| | ||| |||| || |||
Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGGT 193866
>seq15
Length=1932387
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || ||||| ||||| | || || || | ||
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||| ||||| | || || |||||
Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||||||||||||| | ||| || || || |||
Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||| || || || |||||| | || | ||| |||| || |||
Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGGT 1577102
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||| |||||||||||||| || || |||| || || || ||||| | || || ||| |
Sbjct 1576643 AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATC 1576702
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| |||| |||| | ||||| | || ||||| || || | || || ||
Sbjct 1576703 TTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGA 1576762
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||| || | | || || ||||| ||||||||||||||| | ||| || || ||
Sbjct 1576763 CCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTA 1576822
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| ||||| || || || |||||| | || | ||| |||| || ||
Sbjct 1576823 CAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766305274640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |