Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq16 405 6e-108 seq14 360 2e-94 >seq16 Length=1651669 Score = 405 bits (448), Expect = 6e-108 Identities = 1459/2257 (65%), Gaps = 76/2257 (3%) Strand=Plus/Minus Query 62042 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62100 ||||| | ||||| |||| ||| || |||| || || | | |||||||| || |||| Sbjct 931322 CAATGGTAAATTGGATGGCAGCAGAAGCGGCTTGGGTTCTCAAGTAGTACATACCTGTTT 931263 Query 62101 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC- 62158 | | ||| | ||| |||||||||||||| || | ||| || | || | Sbjct 931262 TCAAACCTTTAGACCACCCGTAAAAATGCATGGAGGTCAATTTACCCATGGTTGGGGCCA 931203 Query 62159 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62218 || || || || |||| ||| ||| |||||| || || ||| |||||||||||||| Sbjct 931202 TG--ATGTGAATGTTCAAAGAATGAGATTGATCAATAAAAGCTGATCTGTCTGCAGCCAT 931145 Query 62219 TTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62277 | ||||| || ||||| | | |||||||| ||||| || || || |||| |||| Sbjct 931144 GTCGATGATGGTTTTTTGCGACAATTCCCAAACGGTTTTGTACAAGTCT-TTAAGTTCTT 931086 Query 62278 CTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCT 62334 |||| ||||| || ||||| || || | | ||||| | || || Sbjct 931085 GAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGTTAGCAATAATGTTTGATTTCATGG 931026 Query 62335 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGG 62393 |||| | ||| |||| | || ||| ||||||| | | ||||| || | |||| Sbjct 931025 CATCGTCCCA-AATTCCCAAATCAACCAAATCTCTAAGCAAGTATGGGTTCACAATTTGG 930967 Query 62394 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCA 62453 ||||| |||||||| ||| | || ||| || || ||| | ||||| | | ||| Sbjct 930966 AATTCCCCAGACAAAGTTCTTCTAGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCA 930907 Query 62454 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62513 || | ||||| ||||| | |||||| || || |||||||| |||| | || ||| Sbjct 930906 TTGTAACCCAAGATTTGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGAGTTT 930847 Query 62514 CTAAGACCGTATGTTC-TGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG 62572 || | ||| | | ||| ||||||| ||| | | | |||||| | ||||||||| || || Sbjct 930846 CTTAAACC-TGTTTTCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAAGATCTGATGG 930788 Query 62573 TACAACANNNNNNNNNNNAT---ATTGTAGAATACCGTTACTGGCGTACGATCCTACATA 62629 | | || |||| | || || | || |||||| | | Sbjct 930787 ---AGCTCTGTTCCACATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAA 930731 Query 62630 TGTATCATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATGCACCGTA 62686 | | ||||| ||||||| | | || | || | || || || || ||| ||| Sbjct 930730 CGATTGGTATGGACCTTCCTCCACGGCCATTTCGTTGGAA---GCTTCCAAAGCAGCGTG 930674 Query 62687 ATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATA 62746 || | ||||| || || | | ||||| | || ||||| |||||||||| Sbjct 930673 GTACAATGTTTCGAAAATTTGAATGTTTAGTTGTTTAGCTTCTTCAGAATCAAATGGAAC 930614 Query 62747 ATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62806 | || || ||||| | ||| || || |||||||| || | | | || ||||||||||| Sbjct 930613 TCTCAAAAGCATAAAAGTGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCT 930554 Query 62807 CTTATTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 62863 | | || ||| || ||| ||| | ||||| || || |||| || | | | || Sbjct 930553 CATGTTTGAGTTTCTTGCAGTTTCC---ACTGGATAGTAGTTTCTATCAATGACTCTGTT 930497 Query 62864 GAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--------- 62914 | ||||| || ||||| | || || | || ||| |||| | | Sbjct 930496 CAAGTTTCTTGTGATGACTTTTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGT 930437 Query 62915 TCGCCCATCTATT---AC-------AAACATGTTCAATGCAACAGATGCCAGATTACACA 62964 | | ||| | || ||| || | || |||| || |||| ||||| | Sbjct 930436 TTGGTTRTCTTCTGAAACGTTGATAAAAGCTGGTAAA-GCAATGGAAGCCAAGTTACAAA 930378 Query 62965 CGGC---TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACT 63021 | || | | |||||| || | ||||| | || ||| || | ||| | | Sbjct 930377 CTGCAGTTTCGTCATTATCA---GAATATTCCACAATTTCACAACACAAATTGGATGATT 930321 Query 63022 TGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGA 63081 |||| ||||| || |||| ||| || ||||||||||| ||||| || |||| ||| | Sbjct 930320 TGATGGTTCCCAAGTTTTTTTGGTTGGATTTTTTGTTACAAGCATCTTTGTAAACAATAA 930261 Query 63082 ATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA 63141 |||| ||||| ||||| | || | ||| | ||| || | ||| | | |||| || | Sbjct 930260 ATGGTGTACCTGTTTCTGTTTGTGCTTCCAAAATGGCATACCATAATTTTTGAGCTTTAA 930201 Query 63142 TTATAGATTTGTATCTCCTTTCTCTTT--CGTATAGAGTATACAATCGTTCGAACTCGTC 63199 || | ||| || ||| | |||| | ||| | || ||| ||| || || | Sbjct 930200 TTGTT--TTTCTACCTCTTCCTTCTTGAACATATTTGTTGTATAATTTTTCAAAATCTTT 930143 Query 63200 TCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 63259 || |||||| ||| | |||| |||| ||| | | || | ||| ||| | Sbjct 930142 ACCATAAACATCACTCAAACCAGGAGCTTCACTTGGAGAAAATAATGTCCAATCTGAATT 930083 Query 63260 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGT 63319 || || ||| || |||||| | ||| |||| ||| | || ||| | |||||||| Sbjct 930082 TTCTTTAACTTTTTGCATAAATAAATCTGGAACCCACAAGGCAGGAAACAAATCTCTTGC 930023 Query 63320 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 63379 |||| ||| || || || ||| || || ||| | || | | ||||||| ||| Sbjct 930022 TCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATG 929963 Query 63380 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 63439 ||| ||||| || || | || | | | ||||| | ||| || || || ||||| | || Sbjct 929962 CCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATA 929903 Query 63440 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGT 63499 ||| || || ||||| ||||||| | ||||||||| | || || || | || || || Sbjct 929902 TCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTTTGT 929843 Query 63500 ACCGGAGATATAGCCTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTG 63558 || | ||||| || | | | ||||||| ||| ||| ||||| ||||| || | Sbjct 929842 TCCAGCAATATATGAACCTGTTGATCTAATATTATGAATATGA-AGACCAATTCCACCAG 929784 Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618 | ||||||| || || || ||| |||||| |||||||| || || || || ||||| Sbjct 929783 CAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATCAT 929724 Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678 | |||| || |||||||| ||||||||| | | | ||| || ||||| |||| Sbjct 929723 CTTTCATAGCAACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAATA 929664 Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63738 | || |||||||| || || || || || || | | ||| || || || | | || Sbjct 929663 ATGTTGGAGAAGCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAACTT 929604 Query 63739 AGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796 || ||||| ||| ||||||||| || || || | ||| | || || || ||||| Sbjct 929603 TYTCAATATC--ATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCT 929546 Query 63797 TTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856 |||| |||||| | || ||| | || || || ||| |||| ||||||||||||||||| Sbjct 929545 TTCAGCAATTTGGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAA 929486 Query 63857 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTT 63916 ||| |||||| ||| |||| || |||| |||| | ||| | ||| |||| ||| Sbjct 929485 ATAATTGTATTGAAAATCTCTATCATAAACAATAGCACTATTTAATACATCTTTATTTTT 929426 Query 63917 GTTAACTAT---ATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 63973 | ||| || || | | | ||| ||| || ||||| | | |||||||| Sbjct 929425 TTCAACAATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTC 929369 Query 63974 ATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTG 64033 ||||| ||| ||||||| || |||| | |||| ||||||| |||| || || Sbjct 929368 ATTAATATAAAAATATAAATCAGAAATAACTTGAGAAAATTGTTTTTTAGTTTGTTTATG 929309 Query 64034 TAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 64093 || ||| || || || ||||| || || | | |||||||| ||||| ||||| Sbjct 929308 TAAATTGGAAATTGCAATTCTTGCAGCCAATGTTGCATAATCAGGATGAATAGTAGTCAT 929249 Query 64094 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATAT 64153 | || | |||| || |||| | | |||||||| | || || || || | ||| | Sbjct 929248 ATAAGCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACCCCTTCATAAAC 929189 Query 64154 TCCTTGAAT-AACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCAT 64212 || ||| | ||| | | || || |||||| ||||| | | | || |||| Sbjct 929188 ACCAGAAATGATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCCAAACCAT 929130 Query 64213 AGCACAATTTTCTAATACGAGACGTGATTTTATCAAA 64249 | || ||| | || | ||| |||||||||||||| Sbjct 929129 AACATAATCTGGCTATTCTAGAAGTGATTTTATCAAA 929093 >seq14 Length=1659880 Score = 360 bits (398), Expect = 2e-94 Identities = 625/903 (69%), Gaps = 12/903 (1%) Strand=Plus/Plus Query 33272 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 33331 || || ||| || || |||||| || ||| || | |||||| || ||||| ||||| Sbjct 312431 TTTAGCCATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTT 312490 Query 33332 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAA-Attttt- 33389 |||| |||| || || |||||||| |||||||| || |||| |||||||||| |||||| Sbjct 312491 TCCTGCCAAAGAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTC 312550 Query 33390 -ttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCAT 33448 ||| |||||| || | |||||||| || || ||||| | |||| ||||||| Sbjct 312551 GTTA---CCCAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAA 312607 Query 33449 TTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAAT 33508 || ||||||||||| | || || || || | || | || || |||||| Sbjct 312608 AGCAGCATTCATTCCTAACAAAGATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAAT 312667 Query 33509 GGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATG 33568 || || || | || || || | | | ||| | | ||| | | ||||| Sbjct 312668 AGAAACTGCTTCAGTAATGATTCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATG 312727 Query 33569 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTT 33628 || || | | |||||| |||||| ||||| || || ||||||| ||| ||||| || Sbjct 312728 TTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATT 312787 Query 33629 AGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33688 ||||| || | || ||||| | || || || | |||||| || | ||| || || Sbjct 312788 TGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGA 312847 Query 33689 TCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 33748 ||| |||||||| | ||||| || |||||||| || | | ||| || || || || Sbjct 312848 TCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGC 312907 Query 33749 G-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 || ||| || ||||| | |||||| || ||||| | ||| | ||| || || Sbjct 312908 ATCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGT 312967 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865 ||| |||||||| || | | | | |||| || |||||| | ||||||||| ||||| Sbjct 312968 TTCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAA 313027 Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925 ||| ||| |||| ||||||||||| || || ||||||||||| |||||| | Sbjct 313028 AAGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTT 313087 Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33985 || || | ||| |||||||||| || ||| ||| | ||||||||||| || ||||| Sbjct 313088 GGCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAATTCC 313147 Query 33986 ATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG 34045 |||| ||||||||||| || || || | || ||| || |||| | | | | Sbjct 313148 ATCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCAT 313207 Query 34046 T---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102 | ||||||||||| | | |||||| |||| ||| | |||||| | |||||||| || Sbjct 313208 TCTGTTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGA 313267 Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || ||||| |||||| | ||| || |||||||||| |||||| || | |||||| Sbjct 313268 AGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAA 313327 Query 34163 TCT 34165 ||| Sbjct 313328 TCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817466163760