Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq16 358 6e-94 seq14 268 9e-67 >seq16 Length=1651669 Score = 358 bits (396), Expect = 6e-94 Identities = 1224/1883 (65%), Gaps = 63/1883 (3%) Strand=Plus/Minus Query 36826 GTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTG 36885 ||||||| || ||||| || ||||| | || ||| |||||||||||||| | Sbjct 931287 GTTCTCAAGTAGTACATACCTGTTTTCAAACCTTTAGACCACCCGTAAAAATGCATGGAG 931228 Query 36886 GTCAGTTTTGCGTATG--TAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTA 36943 |||| ||| | ||| | || || || | || ||| || ||| |||||| | Sbjct 931227 GTCAATTTACCC-ATGGTTGGGGCCATG-ATGTGAATGTTCAAAGAATGAGATTGATCAA 931170 Query 36944 TAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCG 37003 |||| || |||||| || ||||| || | || |||||| || | |||||||| | Sbjct 931169 TAAAAGCTGATCTGTCTGCAGCCATGTCGATGATGGTTTTTTGCGACAATTCCCAAACGG 931110 Query 37004 TTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATAGAACCATTAT 37060 |||| || | | ||| | | | || | | | |||||||||||||| || || | Sbjct 931109 TTTTGTACAAGTCTTTAAGTTCTTGAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGT 931050 Query 37061 GTAACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACTTATT-AGTTCTCT 37118 || || | ||| | ||| ||| ||| | ||| || | | | | | | ||||| Sbjct 931049 -TAGCAATAATGTTTGATTTCATGGCATCGTCCCAAAT-TCCCAAATCAACCAAATCTCT 930992 Query 37119 CAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATT 37178 | | || ||| || |||| || || || ||||| || |||||| | || || || Sbjct 930991 AAGCAAGTATGGGTTCACAATTTGGAATTCCCCAGACAAAGTTCTTCTAGAGTACATGTT 930932 Query 37179 GCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGG 37238 |||| ||||||| | | ||||| | || || ||||| || || || || || || Sbjct 930931 TGAAGTAAATGGTTCGAAACATTCATTGTAACCCAAGATTTGCGAAGTTGAAGCCGTTGG 930872 Query 37239 CATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTC 37298 ||| || || | ||| | ||||| || || ||| || || | |||| | || Sbjct 930871 CATAGGAGCCAATAGCAATGAGTTTCTTAAACC---TGTTTTCATGATTTTTTCTC--TC 930817 Query 37299 A-----TTCCAATCCCATAAATCTGTTGG-GTTCTTTAACCACATATCATATTGTAGAAT 37352 | | ||| ||||| | ||||| ||| | ||| | ||||||||| |||| | || Sbjct 930816 AAAGATTCCCATTCCCAAAGATCTGATGGAGCTCTGTT-CCACATATCGAATTGCAAAAC 930758 Query 37353 ACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTC 37412 |||| |||||||| | | | | | | || || || | || | ||| Sbjct 930757 CCCTTGGGAAGCTGGAGATCCTTGAAACGATTGGTATGGACCTTCCTCCACGGCCATTTC 930698 Query 37413 GCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTT 37472 | || ||| | || || | || | ||||||||||||||| || |||| | ||| Sbjct 930697 GTTGGAAGCTTCCAAAGCAGCGTGGTACAATGTTTCGAAAATTTGAATGTTTAGTTGTTT 930638 Query 37473 TGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAAC 37532 |||||||| ||| |||| | | ||| | ||||| || |||||||| ||||| Sbjct 930637 AGCTTCTTCAGAATCAAATGGAACTCTCAAAAGCATAAAAGTGTCGGCCAAACCTTGAAC 930578 Query 37533 ACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGACGATTCTATCACTGGATA 37589 || | | | || ||||||||| || | || || ||| | | ||| ||||||||| Sbjct 930577 CCCTAAAGCAATTGGTCTATGTCTCATGTTTGAGTTTCTTGCAGTTTC---CACTGGATA 930521 Query 37590 ATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAA 37649 || || |||| || | | | || | ||| | | | ||| | | | ||| Sbjct 930520 GTAGTTTCTATCAATGACTCTGTTCAAGTTTCTTGTGATGACTTTTGCGACTTCATGCAA 930461 Query 37650 CTTGTCGAACATAAA---------TACGTTATTAT-TAACAAATTTA------CTC--AA 37691 || | ||| || | | ||| | | | | | || | || || Sbjct 930460 TTTTTTGAAATTATAAGTTTGAGTTTGGTTRTCTTCTGAAACGTTGATAAAAGCTGGTAA 930401 Query 37692 CGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTC 37751 | ||| || | | ||||| || ||| ||| || | | | | ||| | ||| || Sbjct 930400 AGCAATGGAAGCCAAGTTACAAACTGCAGTTTCGTCATTATCAGAATATTCCACAATTTC 930341 Query 37752 TGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACA 37811 ||| | ||| ||| | || |||||||| || |||| ||||||||||| ||||| Sbjct 930340 ACAACACAAATTGGATGATTTGATGGTTCCCAAGTTTTTTTGGTTGGATTTTTTGTTACA 930281 Query 37812 AGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTT 37871 || |||||| || | ||| | || || ||| |||| |||| || || | ||| | | Sbjct 930280 AGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCTGTTTGTGCTTCCAAAATGGCATA 930221 Query 37872 CCATAAACTTCTTGCTTTAACGATCGCTTTAAttttt-ttCTTTGTTT--CGTATTCTAT 37928 |||||| || ||||||| | | ||| | | ||| || || | |||| | Sbjct 930220 CCATAATTTTTGAGCTTTAA---TTGTTTTTCTACCTCTTCCTTCTTGAACATATTTGTT 930164 Query 37929 ATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACA 37988 |||||||| | |||||| || || | ||||| | || || ||| ||| | |||| | Sbjct 930163 GTATAATTTTTCAAAATCTTTACCATAAACATCACTCAAACCAGGAGCTTCACTTGGAGA 930104 Query 37989 CATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAA 38048 | || | ||| ||| || || || || || |||||||||||| || ||||| || Sbjct 930103 AAATAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAACCCACAA 930044 Query 38049 TGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAG 38108 |||| ||| |||||| | | |||| |||||| || || ||| |||| || | | Sbjct 930043 GGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATT-TTTCCGAATATCAA 929985 Query 38109 -AAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTT 38167 |||||| || |||||| ||||||||||||| ||||| | | || || ||||||| Sbjct 929984 TAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTT 929925 Query 38168 TATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTA 38227 ||| ||| || |||| || |||||| | || ||||| | | ||| | ||| || | | Sbjct 929924 TATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCA 929865 Query 38228 TACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTA 38287 |||||||| | |||||| | || | ||||| | ||| | | || |||||| | Sbjct 929864 ATCCATTAGAAGTTCCGTTTGTTCCAGCAATATATGAACCTGTTGATCTAATATTATGAA 929805 Query 38288 TCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAA 38347 | | || |||||||| ||| ||| || || ||||| |||| |||||| || ||| Sbjct 929804 TATGAAGACCAATTCCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTGTCAT 929745 Query 38348 ATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCA 38407 | || || || || ||||| || || | | | |||||| ||||||||| || Sbjct 929744 AAATTCCATCAATTGAATCATCTTTCATAGCAACAAGAAAACATGAAGACATTTGTGGTC 929685 Query 38408 ATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAAT 38467 |||||| || || || |||||||| ||||| ||||| |||| || || |||| Sbjct 929684 TTGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATCTTAATGACATCA 929625 Query 38468 AATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCA 38527 ||||||| ||||| | || | || |||||| || ||||| || | || || |||| Sbjct 929624 AATTATAAGTTTCCAAAACTTTYTCAATATCATTACCATGAATTCCAACAGCAACTCTCA 929565 Query 38528 TTAGCATATGTTGTGGTCTTTCTATTATTT---TATT-ATTCTGTTTAAGTAGATACGAT 38583 | | || ||||||||||||||| |||| ||| |||| |||| || ||| ||| Sbjct 929564 TAATCAAATGTTGTGGTCTTTCAGCAATTTGGCCATTGATTC---TTAA-TAAATAAGAT 929509 Query 38584 TTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTATGCTATTACA 38643 ||||||| ||||| | ||||||||| | ||| | |||||||||| || | || || Sbjct 929508 CTTTCTAAAGTTTTAAAACCAAAATAATTGTATTGAAAATCTCTATCATAAACAATAGCA 929449 Query 38644 TTATCGATTATATCTCTATGTTT 38666 ||| | || |||| ||| ||| Sbjct 929448 CTATTTAATACATCTTTATTTTT 929426 >seq14 Length=1659880 Score = 268 bits (296), Expect = 9e-67 Identities = 606/893 (68%), Gaps = 30/893 (3%) Strand=Plus/Plus Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398 |||||||| ||| ||||| | ||| || ||||| || || ||| | | || || | Sbjct 312450 TTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTTT 312509 Query 11399 TCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAAT 11458 |||||||| ||| || || | |||||| | |||||| ||| || | ||| Sbjct 312510 TCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAATGCAACCAAT 312569 Query 11459 AATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTAT--AA 11516 |||||||| || || ||||| | ||| ||| ||| ||| | |||||| |||| || Sbjct 312570 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACAAA 312629 Query 11517 GATCCACCGGAATAGCAACTGTCAAAAACTCCTTTT-CTATATTAACCGCATCAATGATT 11575 ||| || || | ||| || |||||| || |||| | ||| ||| || ||| | || Sbjct 312630 GATACA--GGTAGTGCATCT-TCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATG 312686 Query 11576 ATCGACGTT-ATAACTTCCTTAGATGGTGGATGTAAT--AAATGTTTAAACATTAAACAC 11632 || | || | | || || ||| | ||| | ||||||| || | || ||| Sbjct 312687 ATT--CTTTCAGCAATTT-TTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACAT 312743 Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 |||||||| ||| | ||||| ||||||| || | |||||| ||||| ||||| || Sbjct 312744 GCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCT 312803 Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752 |||||||| || ||| || | |||||| || |||||||| || ||||||||||| | Sbjct 312804 GGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACA 312863 Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA--CCTTGTT--GCTAGATAT 11808 || |||||||| |||||||| || | |||||| || | | | | || || || || Sbjct 312864 CCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGA-AT 312922 Query 11809 CCATTTTCTGGCCCAATCAGC--TTTCTTT--TTTACGCATTCCATTGTTTCTATAGCGT 11864 |||| | | ||||| || || ||||||| ||| | | |||||||| || || | Sbjct 312923 CCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGA----ATTGTTTCAATGGCAT 312978 Query 11865 TAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACA 11924 | |||||| ||||| | |||| | | ||| ||||| || || | ||| Sbjct 312979 TGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAG 313038 Query 11925 TTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAAC 11984 |||| ||||| |||||||| ||||||||||| || |||||| || || | | Sbjct 313039 TTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAA 313098 Query 11985 ACTGTACATCCACA-TAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGAT 12043 || || || || |||||| |||| | ||||| ||||| ||||| |||||| || | Sbjct 313099 TTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCT 313157 Query 12044 GCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TTATCC 12100 ||||||||||||| | | || || || |||| | || | | | | |||| | Sbjct 313158 GCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 313217 Query 12101 CAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGAT 12160 ||||| | |||||||| |||| ||| | |||||| | ||||||||| || ||| Sbjct 313218 CAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCA 313277 Query 12161 TGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213 ||||||| || ||| || |||||||| || || || || | ||| || || Sbjct 313278 CGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524700438480