Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq16 434 1e-116 seq14 352 4e-92 >seq16 Length=1651669 Score = 434 bits (480), Expect = 1e-116 Identities = 1462/2253 (65%), Gaps = 68/2253 (3%) Strand=Plus/Minus Query 64835 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 ||||| | ||||| |||| ||| || |||| || || | | |||||||| || |||| Sbjct 931322 CAATGGTAAATTGGATGGCAGCAGAAGCGGCTTGGGTTCTCAAGTAGTACATACCTGTTT 931263 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC- 64951 | | ||| | ||| |||||||||||||| || | ||| || | || | Sbjct 931262 TCAAACCTTTAGACCACCCGTAAAAATGCATGGAGGTCAATTTACCCATGGTTGGGGCCA 931203 Query 64952 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 65011 || || || || |||| ||| ||| |||||| || || ||| |||||||||||||| Sbjct 931202 TG--ATGTGAATGTTCAAAGAATGAGATTGATCAATAAAAGCTGATCTGTCTGCAGCCAT 931145 Query 65012 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 65070 | ||||| || ||||| | | |||||||| ||||| || || || |||| |||| Sbjct 931144 GTCGATGATGGTTTTTTGCGACAATTCCCAAACGGTTTTGTACAAGTCT-TTAAGTTCTT 931086 Query 65071 CTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 65127 |||| ||||| || ||||| || || | || ||||| | || || Sbjct 931085 GAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGTTAGCAATAATGTTTGATTTCATGG 931026 Query 65128 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 |||| | ||| |||| | || ||| ||||||| | | || || || | ||| Sbjct 931025 CATCGTCCCA-AATTCCCAAATCAACCAAATCTCTAAGCAAGTATGGGTTCACAATTTGG 930967 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||| |||||||| ||| | || ||| || || ||| | ||||| | | | ||| Sbjct 930966 AATTCCCCAGACAAAGTTCTTCTAGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCA 930907 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 || | ||||| ||||| | |||||| || || |||||||| |||| | || ||| Sbjct 930906 TTGTAACCCAAGATTTGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGAGTTT 930847 Query 65307 CTAAGACCGTATGTTC-TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 65365 || | ||| | | ||| ||||||| ||| | | || |||||| | ||||||||| || || Sbjct 930846 CTTAAACC-TGTTTTCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAAGATCTGATGG 930788 Query 65366 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 65425 | ||| | || || | || |||||| | | | Sbjct 930787 AGCTCTGTTCCACATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAACGA 930728 Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485 | |||||| ||||||| | | || | ||| || || || ||| ||| || | Sbjct 930727 TTGGTATGGACCTTCCTCCACGGCCATTTCGTTGGAAGCTTCCAAAGCAGCGTGGTACAA 930668 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTT 65543 |||||||| || | | ||||| | || ||||| ||| |||||||||| | Sbjct 930667 TGTTTCGAAAATTTGAATGTTTAGTTGTTTAGCTTCTTCAGA--ATCAAATGGAACTCTC 930610 Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603 || || ||||| | ||| || || |||||||| || | | | || |||||||||||| | Sbjct 930609 AAAAGCATAAAAGTGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCTCATG 930550 Query 65604 TTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 65660 || ||| || ||| ||| | ||||| || || |||| || | | | || | Sbjct 930549 TTTGAGTTTCTTGCAGTTTCC---ACTGGATAGTAGTTTCTATCAATGACTCTGTTCAAG 930493 Query 65661 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGC 65711 ||||| || ||||| | || || | || ||| |||| | | | | Sbjct 930492 TTTCTTGTGATGACTTTTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGTTTGG 930433 Query 65712 TCATCTATT---AC-------AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGC 65761 | ||| | || ||| || | || |||| || |||| |||||||| || Sbjct 930432 TTRTCTTCTGAAACGTTGATAAAAGCTGGTAAA-GCAATGGAAGCCAAGTTACAAACTGC 930374 Query 65762 ---TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 65818 | | |||||| || | ||||| | || ||| || | ||| | ||||| Sbjct 930373 AGTTTCGTCATTATCA---GAATATTCCACAATTTCACAACACAAATTGGATGATTTGAT 930317 Query 65819 GGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 65878 |||||| || |||| ||| || ||||||||||| ||||| || |||| ||| ||||| Sbjct 930316 GGTTCCCAAGTTTTTTTGGTTGGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGG 930257 Query 65879 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTAT 65938 ||||| ||||| | || | ||| | ||| || | ||| | | |||| || ||| | Sbjct 930256 TGTACCTGTTTCTGTTTGTGCTTCCAAAATGGCATACCATAATTTTTGAGCTTTAATTGT 930197 Query 65939 AGATTTGTATCTCTTTTCTCTTTCGTATAGTG--TATACAATCGTTCGAACTCGTCTCCC 65996 ||| || ||||| |||| ||| | | || ||| ||| || || | || Sbjct 930196 T--TTTCTACCTCTTCCTTCTTGAACATATTTGTTGTATAATTTTTCAAAATCTTTACCA 930139 Query 65997 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 66056 |||||| ||| |||||| |||| ||| | | || | ||| ||| | || Sbjct 930138 TAAACATCACTCAAACCAGGAGCTTCACTTGGAGAAAATAATGTCCAATCTGAATTTTCT 930079 Query 66057 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTA 66116 || ||| || |||||| | ||| |||| ||| | || ||| |||||||| | |||| Sbjct 930078 TTAACTTTTTGCATAAATAAATCTGGAACCCACAAGGCAGGAAACAAATCTCTTGCTCTA 930019 Query 66117 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCAC 66176 ||| || || || ||| || || ||| | || | | ||||||| |||||| Sbjct 930018 ATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCAT 929959 Query 66177 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 66236 ||||| || || | || | | | ||||| | ||| || || || ||||| | ||||| Sbjct 929958 GGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTT 929899 Query 66237 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 66296 || || ||||| ||||||| | ||||||||| | ||||| || || || || || || Sbjct 929898 GCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTTTGTTCCA 929839 Query 66297 GAGATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCAT 66355 | ||||| || ||| | ||||||| ||| ||| ||||| ||||| || || | Sbjct 929838 GCAATATATGAACCTGTTGATCTAATATTATGAATATGA-AGACCAATTCCACCAGCAGT 929780 Query 66356 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 66415 |||||| || || || ||| |||||| || ||||| || || || || |||||| | Sbjct 929779 TTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATCATCTTT 929720 Query 66416 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 66475 ||| || |||||||| ||||||||| | | ||| || ||||| ||||| || Sbjct 929719 CATAGCAACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAATAATGT 929660 Query 66476 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTC 66535 |||||||| || || || || || || | | ||| || || || | | || || Sbjct 929659 TGGAGAAGCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAACTTTYTC 929600 Query 66536 TATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 66593 ||||| ||| ||||||||| || || || | ||| | || || || ||||||||| Sbjct 929599 AATATC--ATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCA 929542 Query 66594 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 66653 | || | | || ||| | || || || ||| |||| |||||||||||||||||||| Sbjct 929541 GCAATTTGGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAA 929482 Query 66654 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 66713 |||||| ||| |||| || |||| |||| | || | | ||| |||| ||| | | Sbjct 929481 TTGTATTGAAAATCTCTATCATAAACAATAGCACTATTTAATACATCTTTATTTTTTTCA 929422 Query 66714 AC---TACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTG 66770 || | || | | | ||| ||| || ||||| | | |||||||| ||| Sbjct 929421 ACAATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTA 929365 Query 66771 ACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGA 66830 | ||| ||||||| || |||| | |||| ||||||| |||| ||| |||| | Sbjct 929364 ATATAAAAATATAAATCAGAAATAACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAA 929305 Query 66831 TTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTG 66890 || || | || ||||| || || | | |||||||| ||||| ||||| | Sbjct 929304 TTGGAAATTGCAATTCTTGCAGCCAATGTTGCATAATCAGGATGAATAGTAGTCATATAA 929245 Query 66891 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 66950 || | |||| || |||| | | |||||||| | || || || || | ||| | || Sbjct 929244 GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACCCCTTCATAAACACCA 929185 Query 66951 TGGAT-AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACA 67009 || | ||| | | || || |||||| ||||| | | | || |||||||| Sbjct 929184 GAAATGATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCCAAACCATAACA 929126 Query 67010 TAATTTTCTAATACGAGATGTGATTTTATCAAA 67042 |||| | || | ||| |||||||||||||| Sbjct 929125 TAATCTGGCTATTCTAGAAGTGATTTTATCAAA 929093 >seq14 Length=1659880 Score = 352 bits (390), Expect = 4e-92 Identities = 637/919 (69%), Gaps = 23/919 (3%) Strand=Plus/Plus Query 35848 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 35907 || || ||| || || |||||| || ||| || | |||||| || ||||| ||||| Sbjct 312431 TTTAGCCATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTT 312490 Query 35908 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAA-Attttt- 35965 ||| | || || || |||||||| ||||| ||||| ||| |||||| ||| |||||| Sbjct 312491 TCCTGCCAAAGAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTC 312550 Query 35966 -ttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCAT 36024 ||| |||||| || | |||||||| || |||||||| | |||| ||||||| Sbjct 312551 GTTA---CCCAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAA 312607 Query 36025 TTCACAATTCATTCCTAT--AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 36082 || ||||||||||| ||| | || || || || | || | || || |||| Sbjct 312608 AGCAGCATTCATTCCTAACAAAGAT--ACAGGTAGTGCATCTTCAAAATATCTTTTTTCA 312665 Query 36083 ATAGAGACCGCGTCTGTTATAATAGATATTACTGT--TTCTTCACTC-GGTGGATACAAT 36139 ||||| || || || || || || | || | | || || || ||| | Sbjct 312666 ATAGAAACTGCTTCAGTAATGAT---TCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCC 312722 Query 36140 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 36199 ||||||| || | | |||||| |||||| || || || || ||||||| ||| ||| Sbjct 312723 AAATGTTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAAT 312782 Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 || || ||||| || | || ||||| | || || || | |||||| || | ||| Sbjct 312783 TCATTTGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCA 312842 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 36319 || |||||||||||||||| ||||| || || ||||| || | | ||| || || || Sbjct 312843 AAGGATCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAA 312902 Query 36320 CCGGCA-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 36376 ||| || ||| || ||||| | |||||| || ||||| | ||| | ||| Sbjct 312903 AGTGCATCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGA 312962 Query 36377 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 36436 ||||| || || ||||| || | | | | |||| || |||||| | ||| |||||| Sbjct 312963 ATTGTTTCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCA 313022 Query 36437 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 |||||||| ||| |||| ||||||||||| || |||||||||||||| ||| Sbjct 313023 ATCAAAAGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAA 313082 Query 36497 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 36556 ||| | || || | ||| || ||||||| || ||| ||| | ||||||||||| || Sbjct 313083 CATTTGGCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACA 313142 Query 36557 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGT 36616 ||||| ||| ||||||||||| || || || | || ||| || |||| ||| Sbjct 313143 ATTCCATCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCA 313202 Query 36617 GTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 36673 | | | ||||||||||| | | |||||| |||| ||| | |||||| | |||||| Sbjct 313203 TTCATTCTGTTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAA 313262 Query 36674 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 36733 || || || ||||| |||||| | ||| || |||||||||| |||||||| | | Sbjct 313263 AAAGAAGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAA 313322 Query 36734 ACAAATC-TATTTTGATTT 36751 ||||||| | ||||| ||| Sbjct 313323 ACAAATCTTCTTTTGTTTT 313341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172660138280